Evidence map›Paper›PMID 41182255›Full record

ArticleThe Journal of heredity2026

Chromosome-level genome assembly of Norwegian wild alpine reindeer (Rangifer tarandus tarandus).

Ole K Tørresen, Ave Tooming-Klunderud, Morten Skage, Anne Eline Streitlien, Olav Strand, Christer M Rolandsen, Giada Ferrari, José Cerca, Atle Mysterud, Kjetill S Jakobsen

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in The Journal of heredity, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ole K TørresenCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0002-1932-8212
Ave Tooming-KlunderudCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0009-0008-0057-2873
Morten SkageCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0002-5312-8038
Anne Eline StreitlienStreitlievegen 131, 2580 Folldal, Norway.
Olav StrandNorwegian Institute for Nature Research (NINA), P.O. Box 5685 Torgarden, NO-7485 Trondheim, Norway.ORCID 0009-0002-6189-6309
Christer M RolandsenNorwegian Institute for Nature Research (NINA), P.O. Box 5685 Torgarden, NO-7485 Trondheim, Norway.ORCID 0000-0002-5628-0385
Giada FerrariCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0002-0850-1518
José CercaCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0001-7788-4367
Atle MysterudCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0001-8993-7382
Kjetill S JakobsenCentre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, NO-0316 Oslo, Norway.ORCID 0000-0002-8861-5397

Funding

Norwegian Environment AgencyResearch Council of Norway project 326819
6 · The paper itself

Abstract

We describe a chromosome-level genome assembly from a wild alpine reindeer individual (Rangifer tarandus tarandus) from the Rondane area in Southern Norway. The assembly is resolved into two pseudo-haplotypes: hap 1 spanning 3,081 Mb and hap 2 spanning 2,633 Mb. Contig N50 and scaffold N50 lengths are in the range of 31 to 41 and 66 to 69 Mb, respectively. A large part of these two haplotypes (83.8% and 90.4%, respectively) are scaffolded into 34 autosomal chromosomal pseudomolecules, and in sex chromosomes X and Y for hap 1. The BUSCO completeness scores are 98.0% and 95.2%, respectively, and gene annotations of the assemblies identified 37,998 and 36,977 protein-coding genes. We also present an updated and improved genome assembly for Svalbard reindeer (Rangifer tarandus platyrhynchus; contig N50 46 to 48 Mb, scaffold N50 67 to 71 Mb, BUSCO 95.4% to 98.0%) and a comparison with previously published genome assemblies of reindeer.

Indexed as

ChromosomesGenomeReindeerAnimalsFemaleHaplotypesMaleMolecular Sequence AnnotationNorwayEarth Biogenome Project Norwayhaplotype-resolvedHi-CHiFi sequencingRondane populationwild reindeer

Identifiers

PMID41182255
PMCPMC13147171

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.