Evidence map›Paper›PMID 41191777›Full record

ArticleScience translational medicine2025

Immunopeptidomics can inform the design of mRNA vaccines for the delivery of

Owen Leddy, Paul Ogongo, Julia Huffaker, Mingyu Gan, Ryan Milligan, Sheikh Mahmud, Heyuan Michael Ni, Yuko Yuki, Kidist Bobosha, Liya Wassie and 5 more

Abstract read
In one paragraph

Article in Science translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Exhausted CD4Frontiers in immunology · 2026
    Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Owen LeddyDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0000-0002-3437-1956
Paul OgongoDivision of Experimental Medicine, University of California, San Francisco, CA 94110, USA.ORCID 0000-0002-0093-5768
Julia HuffakerDivision of Experimental Medicine, University of California, San Francisco, CA 94110, USA.ORCID 0009-0008-8939-1971
Mingyu GanDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Ryan MilliganRagon Institute of Mass General, Harvard, and MIT, Cambridge, MA 02139, USA.ORCID 0009-0007-7695-5101
Sheikh MahmudDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0009-0006-6063-7259
Heyuan Michael NiDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0000-0003-0881-7245
Yuko YukiMycobacterial Disease Research Directorate, Armauer Hansen Research Institute, Addis Ababa 10005, Ethiopia.ORCID 0000-0003-1721-6003
Kidist BoboshaMycobacterial Disease Research Directorate, Armauer Hansen Research Institute, Addis Ababa 10005, Ethiopia.ORCID 0000-0001-8091-7182
Liya WassieMycobacterial Disease Research Directorate, Armauer Hansen Research Institute, Addis Ababa 10005, Ethiopia.ORCID 0000-0002-5494-5275
Mary CarringtonRagon Institute of Mass General, Harvard, and MIT, Cambridge, MA 02139, USA.ORCID 0000-0002-2692-2180
Qingyun LiuDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0002-2284-5050
Joel D ErnstDivision of Experimental Medicine, University of California, San Francisco, CA 94110, USA.ORCID 0000-0001-9951-6207
Forest M WhiteDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0000-0002-1545-1651
Bryan D BrysonDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0000-0003-1716-6712

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ARTHUR Y KIM · 2004 to 2026
$94.4M
Role of antigen-specific T cell responses in the control of TBU19AI111211 · NIAID · EMORY UNIVERSITY · PI BLUMBERG, HENRY M, ERNST, JOEL D. · 2014 to 2020
$20.1M
TRAINING GRANTS IN ENVIROMENTAL TOXICOLOGYT32ES007020 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2024
$13.1M
Quantitative systems biology of glioblastoma cells and their interactions with the neuronal and immunological milieuU54CA283114 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Forest M White · 2023 to 2026
$9.7M
Ethiopia-Emory TB Research Training ProgramD43TW009127 · FIC · EMORY UNIVERSITY · PI HENRY M BLUMBERG, Kidist Bobosha · 2013 to 2026
$3.4M
Functionally distinct human CD4 T cell responses to novel evolutionarily selected M. tuberculosis antigensR01AI173002 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joel D. Ernst · 2023 to 2026
$3.4M
High-dimensional characterization of phagosome composition, control and phagocytic receptor redundancyR35GM142900 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI BRYSON, BRYAN DAVID · 2021 to 2025
$2.1M
Identification of adaptive response mechanisms in breast cancer by information theory and proteomicsU01CA238720 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KRAVCHENKO-BALASHA, NATALY, WHITE, FOREST M · 2019 to 2023
$2.0M
FIC NIH HHS D43 TW009127NCI NIH HHS U01 CA238720NCI NIH HHS U54 CA283114NIAID NIH HHS P30 AI060354NIAID NIH HHS R01 AI173002NIAID NIH HHS U19 AI111211NIEHS NIH HHS T32 ES007020NIGMS NIH HHS R35 GM142900
6 · The paper itself

Abstract

No currently licensed vaccine reliably prevents pulmonary tuberculosis (TB), a leading cause of infectious disease mortality. Developing effective new vaccines requires identifying which

Indexed as

Antigens, BacterialHistocompatibility Antigens Class IImRNA VaccinesMycobacterium tuberculosisPeptidesTuberculosis VaccinesAntigen PresentationHumansMass SpectrometryPhagocytesAntigens, BacterialHistocompatibility Antigens Class IImRNA VaccinesPeptidesTuberculosis Vaccines

Identifiers

PMID41191777
PMCPMC13220703

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.