Evidence map›Paper›PMID 41210982›Full record

ArticleiScience2025

Proximity interactome mapping furthers a role for spinophilin in protein homeostasis.

Emily T Claeboe, Keyana L Blake, Nikhil R Shah, Cameron W Morris, Basant Hens, Brady K Atwood, Sabrina Absalon, Amber L Mosley, Emma H Doud, Anthony J Baucum

Abstract read
In one paragraph

Article in iScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Emily T ClaeboeDepartment of Biochemistry, Molecular Biology, and Pharmacology, Indiana University School of Medicine, Indianapolis, IN, USA.
Keyana L BlakePost-Baccalaureate Research Education Program, Indiana University Indianapolis, Indianapolis, IN, USA.
Nikhil R ShahMedical Neuroscience Graduate Program, Indiana University School of Medicine, Indianapolis, IN, USA.
Cameron W MorrisMedical Neuroscience Graduate Program, Indiana University School of Medicine, Indianapolis, IN, USA.
Basant HensPharmacology Graduate Training Program, Indiana University School of Medicine, Indianapolis, IN, USA.
Brady K AtwoodDepartment of Pharmacology, University of Minnesota Medical School, Minneapolis, MN, USA.
Sabrina AbsalonDepartment of Biochemistry, Molecular Biology, and Pharmacology, Indiana University School of Medicine, Indianapolis, IN, USA.
Amber L MosleyDepartment of Biochemistry, Molecular Biology, and Pharmacology, Indiana University School of Medicine, Indianapolis, IN, USA.
Emma H DoudDepartment of Biochemistry, Molecular Biology, and Pharmacology, Indiana University School of Medicine, Indianapolis, IN, USA.
Anthony J BaucumDepartment of Biochemistry, Molecular Biology, and Pharmacology, Indiana University School of Medicine, Indianapolis, IN, USA.

Funding

Translation CoreP30DK097512 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI AMBER L. MOSLEY · 2015 to 2026
$17.4M
Spinophilin function in regulating pathological responses to psychostimulant drugR33DA041876 · NIDA · INDIANA UNIVERSITY INDIANAPOLIS · PI BAUCUM, ANTHONY J. · 2018 to 2020
$1.2M
Spinophilin Signaling in the StriatumK01NS073700 · NINDS · VANDERBILT UNIVERSITY · PI BAUCUM, ANTHONY J. · 2012 to 2016
$693k
A novel proteomics approach to identify alcohol-induced changes in synapse-specific presynaptic protein interactions.R21AA030319 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI ATWOOD, BRADY, BAUCUM, ANTHONY J. · 2023 to 2024
$401k
NIAAA NIH HHS R21 AA030319NIDA NIH HHS R33 DA041876NIDDK NIH HHS P30 DK097512NINDS NIH HHS K01 NS073700
6 · The paper itself

Abstract

Spinophilin is a dendritic spine-enriched scaffolding and protein phosphatase 1-targeting protein. To detail spinophilin-interacting proteins, we created an UltraID and ALFA-tagged spinophilin-encoding construct that permits proximity labeling and orthogonal nanobody pull-down (ID-oPD) of spinophilin-associated protein complexes in heterologous cells. Using this ID-oPD approach, we identified 614 UltraID-specific and 312 UltraID-specific and spinophilin-selective spinophilin-interacting proteins in HEK293 cells and validated a subset of these using orthogonal approaches. Many of these proteins are involved in mRNA processing and translation. In the brain, we determined that spinophilin mRNA is highly neuropil localized and that spinophilin may normally function to limit its own expression but promote the expression of other postsynaptic density (PSD)-associated proteins. Overall, our use of an ID-oPD approach uncovers a putative role for spinophilin in mRNA translation and PSD protein expression.

Indexed as

biochemistry applicationsmolecular interactionproperties of biomoleculesproteomics

Identifiers

PMID41210982
PMCPMC12595143

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.