Evidence map›Paper›PMID 41217616›Full record

ArticleApplied biochemistry and biotechnology2026

Diversity of Aromatic Aldehyde Dehydrogenases in Ceriporiopsis subvermispora: Insights into Fungal Vanillin Metabolism.

Junseok Lee, Takahito Watanabe, Naoko Kobayashi, Ayako Kido, Takashi Watanabe

Erratum issuedAbstract read
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Article in Applied biochemistry and biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Junseok LeeLaboratory of Biomass Conversion, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Takahito WatanabeLaboratory of Biomass Conversion, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan. takahito@rish.kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-2770-6818
Naoko KobayashiLaboratory of Biomass Conversion, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Ayako KidoLaboratory of Biomass Conversion, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Takashi WatanabeLaboratory of Biomass Conversion, Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.ORCID http://orcid.org/0000-0003-0220-4157

Funding

Japan Society for the Promotion of Science 23780183Japan Society for the Promotion of Science 26660141Japan Society for the Promotion of Science JP16H04953
6 · The paper itself

Abstract

Lignin-derived aromatic aldehydes are key intermediates in lignocellulosic biomass degradation but can exert cytotoxic effects on microorganisms. Ceriporiopsis subvermispora exhibited enhanced glucose consumption and mycelial growth when cultured in the presence of vanillin, suggesting its ability to metabolize lignin-derived aldehydes. We identified 16 putative aldehyde dehydrogenase genes (Cs-aldhA-P) from C. subvermispora, based on sequence homology to known aromatic aldehyde dehydrogenases (Pc-ALDH1 and Pc-ALDH2) from Phanerochaete chrysosporium. These Cs-Aldhs shared 65.7-89.7% amino acid identity with Pc-ALDHs and contained conserved functional motifs. They were grouped into six clades based on phylogenesis and AlphaFold2-based structural analyses, with pronounced divergence in the architecture of their substrate-binding pockets. Fourteen of these genes were successfully expressed in Rhodococcus erythropolis, and their enzymatic activities were evaluated using fluorescence-based NADH assays. Cs-AldhJ showed broad specificity and high activity (1.86 ± 0.34 to 5.22 ± 0.05 U/mg), whereas Cs-AldhA and Cs-AldhK exhibited lower activities, ranging from 0.02 ± 0.00 to 0.08 ± 0.01 U/mg and 0.05 ± 0.01 to 0.38 ± 0.01 U/mg, respectively. The corresponding oxidation products were confirmed by GC-MS, and kinetic analyses revealed mechanistic diversity among the enzymes. These findings highlight the functional diversification of the Cs-Aldh family and provide molecular insights into the cellular responses of C. subvermispora to lignin-derived aromatic compounds.

Indexed as

Aldehyde DehydrogenaseBenzaldehydesCoriolaceaeFungal ProteinsLigninPhylogenyRhodococcusSubstrate SpecificityAldehyde DehydrogenaseBenzaldehydesFungal ProteinsLigninvanillinAromatic aldehyde dehydrogenaseCeriporiopsis subvermisporaLignin degradationRhodococcusSyringaldehydeVanillinWhite-rot fungus

Identifiers

PMID41217616
PMCPMC12894122

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.