Evidence map›Paper›PMID 41219406›Full record

SynthesisScientific reports2025

Integrative meta-analysis and experimental validation reveal the oncogenic role of SACS and its therapeutic targeting potential in colorectal cancer.

Chunmei Chen, Jun Li, Beibei Wen, Wenwei Dou, Haisheng Zhu

Abstract readMeta-Analysis
In one paragraph

Synthesis in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chunmei ChenDepartment of Oncology, The Sixth Affiliated Hospital of Guangxi Medical University (First People's Hospital of Yulin), Yulin, 537000, Guangxi Zhuang Autonomous Region, China.
Jun LiDepartment of Oncology, The Sixth Affiliated Hospital of Guangxi Medical University (First People's Hospital of Yulin), Yulin, 537000, Guangxi Zhuang Autonomous Region, China.
Beibei WenDepartment of Oncology, The Sixth Affiliated Hospital of Guangxi Medical University (First People's Hospital of Yulin), Yulin, 537000, Guangxi Zhuang Autonomous Region, China.
Wenwei DouDepartment of Oncology, The Sixth Affiliated Hospital of Guangxi Medical University (First People's Hospital of Yulin), Yulin, 537000, Guangxi Zhuang Autonomous Region, China.
Haisheng ZhuDepartment of Oncology, The Sixth Affiliated Hospital of Guangxi Medical University (First People's Hospital of Yulin), Yulin, 537000, Guangxi Zhuang Autonomous Region, China. ylzhuhaisheng@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aims to identify core genes closely associated with the diagnosis and prognosis of colorectal cancer (CRC) using transcriptome-based meta-analysis approach and machine learning algorithms. Nine CRC datasets from the GEO database were integrated for differential gene expression analysis and WGCNA to identify key genes. Ninety-six combinations of machine learning algorithms were employed to further refine the selection of core genes and validate their diagnostic performance. Functional enrichment, molecular pathways, and associations with the immune microenvironment of core genes were analyzed using GSEA, CIBERSORT, and ssGSEA. Drug sensitivity predictions were performed to evaluate the impact of core genes on CRC drug response, and molecular docking simulations were used to identify candidate compounds targeting the core genes. A total of 26 core genes were identified, among which the high expression of the SACS gene was significantly associated with poor prognosis, advanced stage, and specific pathological subtypes in CRC patients. GSEA revealed that high SACS expression prominently activates cell cycle regulatory pathways and immune pathways while suppressing metabolic pathways. Furthermore, in vitro experiments demonstrated that SACS is highly expressed in CRC cells and that its knockdown significantly inhibits CRC cell proliferation, suggesting its functional role in tumor growth. Immune analysis showed that high SACS expression was positively correlated with activated NK cells but negatively correlated with Tregs and resting NK cells. Drug sensitivity analysis indicated that high SACS expression reduces sensitivity to oxaliplatin. Molecular docking identified coumestrol and quercetin as potential compounds targeting SACS. SACS promotes CRC progression by regulating cell cycle pathways, the immune microenvironment, and metabolic pathways. And it may serve as a potential therapeutic target for CRC.

Indexed as

Colorectal NeoplasmsBiomarkers, TumorCell Line, TumorCell ProliferationGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMachine LearningMolecular Docking SimulationPrognosisTranscriptomeTumor MicroenvironmentBiomarkers, TumorColorectal cancerDrug sensitivityImmune microenvironmentMachine learningMolecular mechanismsSACS gene

Identifiers

PMID41219406
PMCPMC12606282

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.