Evidence map›Paper›PMID 41219507›Full record

ArticleNature neuroscience2025

APOE4 to APOE2 allelic switching in mice improves Alzheimer's disease-related metabolic signatures, neuropathology and cognition.

Lesley R Golden, Dahlia S Siano, Isaiah O Stephens, Steven M MacLean, Kai Saito, Georgia L Nolt, Jessica L Funnell, Akhil V Pallerla, Sangderk Lee, Cathryn Smith and 12 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Kinetic Lipidomics: QuantifyingbioRxiv : the preprint server for biology · 2026
    Article
  4. APOE*4 risk-modifying genes and drug targets in Alzheimer's disease through cell-type-specific genomic analyses.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Amyloid-Frontiers in neuroscience · 2026
    Review
  9. Review
  10. Review
  11. medRxiv : the preprint server for health sciences · 2025
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Lesley R GoldenDepartment of Physiology, University of Kentucky, Lexington, KY, USA.ORCID http://orcid.org/0000-0001-8922-8850
Dahlia S SianoDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Isaiah O StephensDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Steven M MacLeanDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Kai SaitoSanders-Brown Center on Aging, University of Kentucky, Lexington, KY, USA.
Georgia L NoltDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Jessica L FunnellDepartment of Physiology, University of Kentucky, Lexington, KY, USA.ORCID http://orcid.org/0000-0003-1971-6028
Akhil V PallerlaDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Sangderk LeeDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Cathryn SmithDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Jing ChenDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, KY, USA.
Haining ZhuDepartment of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, KY, USA.
Clairity VoyDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Callie M WhitusDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Gabriela HernandezDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Brandon C FarmerDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Kumar PandyaTransViragen Inc., Chapel Hill, NC, USA.
Dale O CowleyTransViragen Inc., Chapel Hill, NC, USA.ORCID http://orcid.org/0000-0001-5697-5817
Shannon L MacauleyDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Scott M GordonDepartment of Physiology, University of Kentucky, Lexington, KY, USA.
Josh M MorgantiSanders-Brown Center on Aging, University of Kentucky, Lexington, KY, USA.ORCID http://orcid.org/0000-0002-4183-0049
Lance A JohnsonDepartment of Physiology, University of Kentucky, Lexington, KY, USA. Johnson.Lance@uky.edu.ORCID http://orcid.org/0000-0003-0134-7586

Funding

University of Kentucky Alzheimer's Disease Research CenterP30AG072946 · NIA · UNIVERSITY OF KENTUCKY · PI Daniel Carl Lee · 2021 to 2026
$23.5M
Sustained eIF5A hypusination at the core of brain metabolic dysfunction in TDP-43 proteinopathiesP20GM148326 · NIGMS · UNIVERSITY OF KENTUCKY · PI Patrick G Sullivan · 2023 to 2026
$10.6M
The metabolic interplay of sleep and Alzheimer's diseaseR01AG068330 · NIA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MACAULEY-RAMBACH, SHANNON L · 2020 to 2024
$3.5M
Contributions of astrocyte RelA signaling in aging-related neurodegenerative sequelae following TBIR01AG070830 · NIA · UNIVERSITY OF KENTUCKY · PI MORGANTI, JOSH · 2021 to 2025
$3.3M
APOE Allele Switching as a Therapeutic Approach for Alzheimer's DiseaseR01AG080589 · NIA · UNIVERSITY OF KENTUCKY · PI Lance Allen Johnson · 2023 to 2026
$2.6M
The Role of DENND5B in Dietary Lipid AbsorptionR01DK133184 · NIDDK · UNIVERSITY OF KENTUCKY · PI Scott M Gordon · 2022 to 2026
$2.5M
Assessing the role of APOE in glial lipid droplet metabolism and functionR01AG081421 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Sarah Cohen, Lance Allen Johnson · 2023 to 2026
$2.4M
Inflammatory contributions of astrocytic RelA in comorbid VCID/ADRF1NS118558 · NINDS · UNIVERSITY OF KENTUCKY · PI MORGANTI, JOSH · 2020 to 2021
$2.4M
Training in Translational Research in Alzheimer's and Related Dementias (TRIAD)T32AG078110 · NIA · UNIVERSITY OF KENTUCKY · PI Michael Paul Murphy, LINDA J VAN ELDIK · 2022 to 2026
$2.3M
Examining the Effects of the Neuroprotective APOE2 Allele on Peripheral ImmunometabolismR01AG062550 · NIA · UNIVERSITY OF KENTUCKY · PI JOHNSON, LANCE ALLEN · 2019 to 2023
$2.2M
Training in Translational Research in Alzheimer's and Related Dementias (TRIAD)T32AG057461 · NIA · UNIVERSITY OF KENTUCKY · PI MURPHY, MICHAEL PAUL, VAN ELDIK, LINDA J · 2017 to 2021
$2.1M
Lactate as a regulator of Alzheimer's pathologyR01AG093847 · NIA · UNIVERSITY OF KENTUCKY · PI Shannon L Macauley-Rambach · 2025 to 2026
$1.5M
BLRD VA I01 BX002149BLRD VA IK6 BX006316NIA NIH HHS P30 AG072946NIA NIH HHS R01 AG062550NIA NIH HHS R01 AG068330NIA NIH HHS R01 AG070830NIA NIH HHS R01 AG080589NIA NIH HHS R01 AG081421NIA NIH HHS R01 AG093847NIA NIH HHS T32 AG057461NIA NIH HHS T32 AG078110NIDDK NIH HHS R01 DK133184NIGMS NIH HHS P20 GM148326NINDS NIH HHS RF1 NS118558U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R01AG081421
6 · The paper itself

Abstract

Compared to individuals carrying two copies of the ε4 allele of apolipoprotein E (APOE), ε2 homozygotes have an approximate 99% reduction in late-onset Alzheimer's disease (AD) risk. Here we develop a knock-in model that allows for an inducible 'switch' between risk and protective alleles (APOE4s2). Gene expression and proteomic analyses confirm that APOE4s2 mice synthesize E4 at baseline and E2 after tamoxifen administration. A whole-body allelic switch results in a metabolic profile resembling E2/E2 humans and drives AD-relevant alterations in the lipidome and single-cell transcriptome, particularly in astrocytes. Finally, when crossed to the 5xFAD background, astrocyte-specific E4 to E2 switching improves cognition, decreases amyloid pathology, lowers gliosis and reduces plaque-associated apolipoprotein E. Together, these data show that a short-term transition from APOE4 to APOE2 can broadly affect the cerebral transcriptome and lipidome, and that astrocyte-specific APOE replacement may be a viable strategy for future gene editing approaches to simultaneously reduce multiple AD-associated pathologies.

Indexed as

Alzheimer DiseaseApolipoprotein E2Apolipoprotein E4CognitionAllelesAnimalsAstrocytesBrainDisease Models, AnimalFemaleGene Knock-In TechniquesHumansMaleMiceMice, Inbred C57BLMice, TransgenicApolipoprotein E2Apolipoprotein E4

Identifiers

PMID41219507
PMCPMC12672373

What Socratic holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.