Evidence map›Paper›PMID 41230847›Full record

ArticleThe Biochemical journal2025

A minimum catalytic unit for synthesis of InsP6 and 5-PP-InsP5 in Arabidopsis.

Hayley L Whitfield, Colleen Sprigg, Andrew M Riley, Barry V L Potter, Hui-Fen Kuo, Charles A Brearley

Abstract read
In one paragraph

Article in The Biochemical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hayley L WhitfieldSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, U.K.ORCID 0000-0001-6003-7874
Colleen SpriggSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, U.K.ORCID 0000-0001-7755-4245
Andrew M RileyMedicinal Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Oxford, OX1 3QT, U.K.ORCID 0000-0001-9003-3540
Barry V L PotterMedicinal Chemistry & Drug Discovery, Department of Pharmacology, University of Oxford, Oxford, OX1 3QT, U.K.ORCID 0000-0003-3255-9135
Hui-Fen KuoAgricultural Biotechnology Research Centre, Academia Sinica, Taipei, 115, Taiwan.ORCID 0000-0002-9169-3679
Charles A BrearleySchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, U.K.ORCID 0000-0001-6179-9109

Funding

Biotechnology and Biological Sciences Research Council BB/M011216/1Natural Environment Research Council NE/W000350/1Wellcome Trust 101010
6 · The paper itself

Abstract

Inositol pyrophosphates (diphosphoinositol phosphates) are reported agents of phosphate homeostasis, disease resistance, and hormone action in plants. Of the enzymes that have been shown to synthesize inositol pyrophosphates, inositol tris/tetrakisphosphate (ITPK)1 and Arabidopsis thaliana diphosphoinositol pentakisphosphate kinase (VIH)1/VIH2 share the ATP-grasp fold-the latter also possesses a phosphatase domain. Among ATP-grasp inositol phosphate kinases, ITPK1 is particularly flexible-phosphorylating equatorial hydroxyls and equatorial phosphates on inositol phosphates. Herein, we show that the combination of ITPK1 and inositol pentakisphosphate 2-kinase (IPK1) is sufficient to synthesize 5-PP-InsP5 from 1D-myo-inositol 3-monophosphate (Ins3P) and that ITPK1 is capable of converting 1D-myo-inositol 1-monophosphate to myo-inositol 1,3,4,5,6-pentakisphosphate [Ins(1,3,4,5,6)P5]. In defining a minimal catalytic unit for synthesis of both myo-inositol 1,2,3,4,5,6-hexakisphosphate (InsP6/Ins(1,2,3,4,5,6)P6) and 5-PP-InsP5, we define the minimum enzymology of the 'lipid-independent' pathway of InsP6 synthesis from Ins3P and its intermediates. The pathway proceeds: Ins3P, 1D-myo-inositol 3,4-bisphosphate, 1D-myo-inositol 3,4,5-trisphosphate, 1D-myo-inositol 3,4,5,6-tetrakisphosphate, Ins(1,3,4,5,6)P5, Ins(1,2,3,4,5,6)P6, and therefrom to 5-diphosphoinositol-1,2,3,4,6-pentakisphosphate [5-PP-Ins(1,2,3,4,6)P5].

Indexed as

ArabidopsisArabidopsis ProteinsInositol PhosphatesPhosphotransferases (Phosphate Group Acceptor)Phytic AcidPhosphorylationPhosphotransferases (Alcohol Group Acceptor)1-diphosphoinositol pentakisphosphateArabidopsis ProteinsAT5G16760 protein, Arabidopsisdiphosphoinositol pentakisphosphate kinaseinositol 1,3,4,5,6-pentakisphosphate 2-kinase, ArabidopsisInositol PhosphatesPhosphotransferases (Alcohol Group Acceptor)Phosphotransferases (Phosphate Group Acceptor)Phytic Acidcell biologyinositolphosphate

Identifiers

PMID41230847
PMCPMC7618535

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.