Evidence map›Paper›PMID 41234536›Full record

ArticleFrontiers in behavioral neuroscience2025

Refinement of the novel tank diving test: toward standardized and robust analysis of anxiety-like behavior in zebrafish.

Takuro Shinkai, Misa Nakai, Uzuki Takeshita, Kento Morita, Yasuhito Shimada

Abstract read
In one paragraph

Article in Frontiers in behavioral neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Takuro ShinkaiGraduate School of Regional Innovation Studies, Mie University, Tsu, Japan.
Misa NakaiGraduate School of Regional Innovation Studies, Mie University, Tsu, Japan.
Uzuki TakeshitaGraduate School of Bioresources, Mie University, Tsu, Japan.
Kento MoritaMie University Zebrafish Research Center, Tsu, Japan.
Yasuhito ShimadaMie University Zebrafish Research Center, Tsu, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The novel tank diving test (NTT) is a widely used behavioral assay for evaluating anxiety-like behaviors in zebrafish; however, results often exhibit considerable variability across different experimental settings. In this study, we systematically analyzed various methodological factors influencing the outcomes of NTT and introduced refinements to enhance its reliability and reproducibility. We optimized the detection parameters for region entry and freezing behavior using logistic regression analysis, significantly reducing false-positive classifications caused by tracking artifacts. The impact of pre-test stress conditions-restraint and darkness-was assessed, demonstrating that restraint effectively decreased the variability in behavioral parameters, such as latency to enter the top half (LTTH) of the tank and frequency of entries (FE). Conversely, combining darkness with restraint induced abnormal behaviors, limiting utility of the test. The effects of temperature were also rigorously evaluated, revealing that even subtle deviations within 3 °C of the standard temperature of 26.5 °C significantly affected behavioral variability, and 26.5 °C was optimal for reliable outcomes. Furthermore, we demonstrated that net-chasing during fish handling significantly increased the freezing time, suggesting the adoption of funnel-based transfers to reduce stress artifacts. Finally, behavioral patterns during stable test conditions followed a Poisson process, enabling the estimation of optimal test durations. Overall, our proposed refinements help establish a standardized, robust NTT protocol that minimizes variability and enhances the assay's sensitivity and reproducibility to investigate anxiety behavior in zebrafish.

Indexed as

drug testingenvironmentin vivomodel animalquantitative analysisstochastic model

Identifiers

PMID41234536
PMCPMC12605500

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.