Evidence map›Paper›PMID 41244690›Full record

ArticleFrontiers in microbiology2025

Genetic and virulence factors behind the success of high-risk

Romário Oliveira de Sales, Laura Leaden, Dayblegschwel Santos Martins, Paula Koga, Alexandra do Rosario Toniolo, Fernando Gatti de Menezes, Marcelo Alves Mori, Marines D V Martino, Patricia Severino

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. High-risk lineages shape the resistome and virulome of multidrug-resistantFrontiers in cellular and infection microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Romário Oliveira de SalesAlbert Einstein Research and Education Institute, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Laura LeadenAlbert Einstein Research and Education Institute, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Dayblegschwel Santos MartinsAlbert Einstein Research and Education Institute, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Paula KogaLaboratório Clínico, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Alexandra do Rosario TonioloServiço de Controle de Infecção Hospitalar, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Fernando Gatti de MenezesServiço de Controle de Infecção Hospitalar, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Marcelo Alves MoriInstitute of Biology, Universidade Estadual de Campinas, Campinas, Brazil.
Marines D V MartinoLaboratório Clínico, Hospital Israelita Albert Einstein, São Paulo, Brazil.
Patricia SeverinoAlbert Einstein Research and Education Institute, Hospital Israelita Albert Einstein, São Paulo, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Methods: We analyzed 84 clinical isolates plus publicly available genomes using WGS, phylogenomics, and resistome/virulome profiling. Virulence was measured by Results: Although high-risk and sporadic clones carried a similar total number of antimicrobial-resistance genes, 15/67 (22.38%) genes/variants were enriched in high-risk clones, producing class-level enrichment ( Conclusion: Accessory-genome GWAS revealed two risk dimensions: acute-virulence programs (HVA) versus mobility functions (LVA) favoring persistence and spread. Because SK measures acute virulence, readouts did not align with high-risk designations. Genomic reports should combine high-risk assignment with accessory-genome and effector profiling to support earlier containment and mechanism-aware, biofilm-focused care.

Indexed as

antimicrobial resistanceCaenorhabditis eleganscomparative genomicsgenome-wide association study (GWAS)high-risk clonesPseudomonas aeruginosavirulence factors

Identifiers

PMID41244690
PMCPMC12616638

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.