Evidence map›Paper›PMID 41258166›Full record

ArticleEMBO reports2025

NANOG governs cell metabolism and redox homeostasis in human naïve embryonic stem cells.

Min Shao, Han Wang, Yujie Liu, Yongqiang Wang, Hanzhi Zhao, Junjie Gu, Ning Zhong, Yifan Zhou, Huiyong Yin, Ying Jin and 1 more

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Min Shao *Department of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.ORCID 0009-0004-8811-2468
Han Wang *Department of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.ORCID 0000-0002-1125-3543
Yujie LiuDepartment of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.ORCID 0009-0008-3292-1804
Yongqiang WangUniversity of CAS, Beijing, China.
Hanzhi ZhaoThe Key Laboratory of Tissue Microenvironment and Tumor, Shanghai Institute of Nutrition and Health (SINH), Chinese Academy of Sciences (CAS), Shanghai, China.
Junjie GuDepartment of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.
Ning ZhongDepartment of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.
Yifan ZhouThe Key Laboratory of Tissue Microenvironment and Tumor, Shanghai Institute of Nutrition and Health (SINH), Chinese Academy of Sciences (CAS), Shanghai, China.
Huiyong YinThe Key Laboratory of Nutrition, Metabolism and Food Safety Research, SINH, CAS, Shanghai, China.
Ying JinDepartment of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China. yjin@sibs.ac.cn.ORCID 0000-0003-0070-2048
Bing LiaoDepartment of Histoembryology, Genetics and Developmental Biology, Shanghai Key Laboratory of Reproductive Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China. liaobing@shsmu.edu.cn.ORCID 0000-0003-1279-1682

Funding

Innovative Research Team of High-level Local University in Shanghai (Innovative Research Team of High-level Local Universities in Shanghai) SHSMU-ZLCX20210201Ministry of Science and Technology of the People's Republic of China (MOST) 2016YFA0100100Ministry of Science and Technology of the People's Republic of China (MOST) 2021YFA1100400MOST | National Natural Science Foundation of China (NSFC) 32170796MOST | National Natural Science Foundation of China (NSFC) 32370847
6 · The paper itself

Abstract

Naïve human embryonic stem cells (hESCs) possess some advantages over their primed counterparts, displaying distinctive metabolic and epigenetic properties. However, the master regulator governing these features remains unrecognized. Here, we systematically investigate functions of the core transcription factor NANOG in naïve hESCs. Acting as an upstream key regulator, NANOG directly activates genes associated with naïve pluripotency, acetyl-CoA synthesis and anti-oxidation in a naïve pluripotency state- dependent manner, and represses the expression of extraembryonic lineage genes in naïve hESCs. NANOG modulates transcription of multiple genes in various pathways of acetyl-CoA synthesis, maintains the intracellular acetyl-CoA level and characteristic epigenetic landscapes, particularly the high level of histone acetylation, in naïve hESCs. NANOG is indispensable for the high activity of both OXPHOS and glycolysis, a bivalent metabolic state typical in naïve hESCs. Furthermore, we identify GPX2 as a mediator of NANOG in sustaining redox balance and survival of naïve hESCs. Together, this study reveals previously unrecognized roles of NANOG in orchestrating transcriptional, metabolic and epigenetic signatures to secure human naïve pluripotency.

Indexed as

HomeostasisHuman Embryonic Stem CellsNanog Homeobox ProteinAcetyl Coenzyme ACell DifferentiationCell LineEpigenesis, GeneticGlutathione PeroxidaseGlycolysisHistonesHumansOxidation-ReductionOxidative PhosphorylationAcetyl Coenzyme AGlutathione PeroxidaseHistonesNanog Homeobox ProteinNANOG protein, humanAcetyl-CoA SynthesisGPX2Histone AcetylationHuman Naïve PluripotencyNANOG

Identifiers

PMID41258166
PMCPMC12714712

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.