Evidence map›Paper›PMID 41278655›Full record

ArticlebioRxiv : the preprint server for biology2025

Liver sinusoid constraints make random search of CD8 T cells for Plasmodium parasites efficient.

Viktor S Zenkov, Ian A Cockburn, Raymond Lin, Whitney N Griffith, Michael A Langston, Vitaly V Ganusov

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Viktor S ZenkovElectrical Engineering and Computer Science, University of Tennessee, Knoxville, TN 37996, USA.ORCID 0000-0002-8864-1835
Ian A CockburnDivision of Immunology and Infectious Disease, John Curtin School of Medical Research, Australian National University, Canberra, ACT, 2601, Australia.ORCID 0000-0001-8220-9294
Raymond LinBiochemistry and Molecular Biology, University of Tennessee, Knoxville, TN 37996, USA.
Whitney N GriffithBiochemistry and Molecular Biology, University of Tennessee, Knoxville, TN 37996, USA.
Michael A LangstonElectrical Engineering and Computer Science, University of Tennessee, Knoxville, TN 37996, USA.
Vitaly V GanusovTexas Biomedical Research Institute, San Antonio, Texas, USA.ORCID 0000-0001-6572-1691

Funding

Mathematical modeling of Mycobacterium tuberculosis disseminationR01AI158963 · NIAID · UNIVERSITY OF TENNESSEE KNOXVILLE · PI Vitaly V. Ganusov · 2022 to 2026
$3.2M
Mathematical modeling of immune response to malariaR01GM118553 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI GANUSOV, VITALY V. · 2017 to 2021
$1.6M
NIAID NIH HHS R01 AI158963NIGMS NIH HHS R01 GM118553
6 · The paper itself

Abstract

A relatively small number of liver-localized CD8 T cells can provide sterilizing protection against exposure to Plasmodium sporozoites. Previously published mathematical model-based simulations of randomly searching for an infection T cells, assuming that T cells move in open (3D) space or on a regular lattice, suggested that some degree of attraction is needed for cells to find the infection. Yet, in our previous experiments we failed to find evidence of attraction towards the infection in most T cells. Because the movement of liver-localized T cells is confined to sinusoids, the blood vessels of the liver, T cells may in fact be attracted to the infection site via the sinusoids. In new experiments we imaged Plasmodium-specific CD8 T cells, sporozoites, and liver sinusoids simultaneously. We also developed a new method to model imaged sinusoids as graphs and to simulate movement of T cells on graphs, and new tests to detect biased cell movement on graphs. As before, our previously published open space/3D-based metric suggested that few T cells are attracted to the infection site in presence of moderate cluster of T cells. However, with our new graph-based metric we could not detect attraction when constraining T cell movement to sinusoids. Surprisingly, simulations of T cells searching for an infection via liver sinusoids showed that a relatively small number of T cells (1 cell/imaging volume or < 10

Identifiers

PMID41278655
PMCPMC12632764

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.