Evidence map›Paper›PMID 41279112›Full record

ArticlebioRxiv : the preprint server for biology2025

A chromosome-level assembly and functional genomic resources for the model annelid

Billie E Davies, Paul Gonzalez, Abhinav Sur, Jingcheng Wei, Tom Frankish, Jimena Montagne, Allan M Carrillo-Baltodano, Kero Guynes, Yan Liang, Rory D Donnellan and 8 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Billie E DaviesSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Paul GonzalezCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Abhinav SurDivision of Intramural Research, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
Jingcheng WeiSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Tom FrankishSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Jimena MontagneSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Allan M Carrillo-BaltodanoSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Kero GuynesSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Yan LiangSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
Rory D DonnellanSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.
R Travis MorelandCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Sumeeta SinghCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Suiyuan ZhangCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Tyra G WolfsbergCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Néva P MeyerBiology Department, Clark University, Worcester, Massachusetts, USA.
Elaine C SeaverWhitney Laboratory for Marine Bioscience, University of Florida, 9505 Ocean Shore Dr., Saint Augustine, FL 32080, USA.
Andreas D BaxevanisCenter for Genomics and Data Science Research, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
José M Martín-DuránSchool of Biological and Behavioural Sciences, Queen Mary University of London, Mile End Road, E1 4NS, London, United Kingdom.

Funding

Phylogenomic Studies on the Evolution of Morphological ComplexityZIAHG000140 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAXEVANIS, ANDREAS · 2009 to 2025
$11.4M
Intramural NIH HHS ZIA HG000140
6 · The paper itself

Abstract

Background: The polychaete Results: We combine long-read and short-read sequencing with Hi-C chromatin conformation capture data to assemble the chromosome-level nuclear and mitochondrial genomes of the laboratory strain of Conclusions: Our study provides state-of-the-art genomic resources for the polychaete model

Indexed as

AnnelidaCapitella teletachromosomecomparative genomicsgenomegenome browsermacrosyntenymitochondrial genomesingle-cell RNA-seqSpiralia

Identifiers

PMID41279112
PMCPMC12637686

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.