Evidence map›Paper›PMID 41279991›Full record

ArticlebioRxiv : the preprint server for biology2025

An unconventional HxD motif orchestrates coatomer-dependent coronavirus morphogenesis.

Surovi Mohona, Anil K Shakya, Suruchi Singh, Fiona L Kearns, Kezia Jemison, Satchal Erramilli, Debajit Dey, Enya Qing, Benjamin C Jennings, Balraj Doray and 5 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Surovi MohonaDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood IL, 60153, USA.
Anil K ShakyaDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore MD 21201, USA.
Suruchi SinghDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore MD 21201, USA.
Fiona L KearnsDepartment of Molecular Biology, University of California San Diego, La Jolla CA, 92093, USA.
Kezia JemisonDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla CA, 92093, USA.
Satchal ErramilliDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago IL, 60637, USA.
Debajit DeyDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore MD 21201, USA.
Enya QingDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood IL, 60153, USA.
Benjamin C JenningsDepartment of Internal Medicine, Hematology Division, Washington University School of Medicine, St. Louis, MO 63110, USA.
Balraj DorayDepartment of Internal Medicine, Hematology Division, Washington University School of Medicine, St. Louis, MO 63110, USA.
Anthony A KossiakoffDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago IL, 60637, USA.
Rommie E AmaroDepartment of Molecular Biology, University of California San Diego, La Jolla CA, 92093, USA.ORCID 0000-0002-9275-9553
Thomas KloseDepartment of Biological Sciences, Purdue University, West Lafayette IN 47907, USA.
Tom GallagherDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood IL, 60153, USA.
S Saif HasanDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore MD 21201, USA.

Funding

UNIVERSITY OF MARYLAND GREENEBAUM CANCER CENTERSUPPORT GRANTP30CA134274 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI FEYRUZ VIRGILIA RASSOOL · 2008 to 2026
$51.0M
X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Vivian Stojanoff · 2019 to 2026
$38.6M
Chaperone-Assisted Structure Determination of Membrane ProteinsR01GM117372 · NIGMS · UNIVERSITY OF CHICAGO · PI ANTHONY A KOSSIAKOFF · 2016 to 2026
$4.0M
Biophysical, Structural, and Cellular Dissection of COPI-Dependent Retrograde Trafficking Using a Coronavirus ToolkitR01GM150187 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI Syed Saif Hasan · 2023 to 2026
$1.6M
Elyra 7 Lattice SIM2 Super-Resolution MicroscopeS10OD034431 · OD · LOYOLA UNIVERSITY CHICAGO · PI CAMPBELL, EDWARD M · 2023 to 2023
$590k
Dissecting the peptide motifs controlling coronavirus infectionsR21AI176252 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI GALLAGHER, THOMAS MILLER · 2023 to 2024
$406k
NCI NIH HHS P30 CA134274NIAID NIH HHS R21 AI176252NIGMS NIH HHS P30 GM133893NIGMS NIH HHS R01 GM117372NIGMS NIH HHS R01 GM150187NIH HHS S10 OD034431
6 · The paper itself

Abstract

Assembly of infectious coronaviruses requires spike (S) protein trafficking by host coatomer, typically via a dibasic signal in the S cytoplasmic tail. However, the human embecoviruses HKU1 and OC43, as well as the model virus MHV, lack this motif. Here we identify a conserved His-x-Asp (HxD) sequence that functions as an unconventional coatomer-binding signal. Structural and biochemical analyses show that the MHV HxD motif engages coatomer subunits through distinct conformations, while cellular imaging demonstrates its role in directing S to assembly sites with the viral M-protein. Disruption of HxD-coatomer interactions impairs S incorporation and provokes compensatory viral adaptations, including emergence of a canonical dibasic motif or mutations in M-protein. Electron microscopy further reveals profound alterations in virion surface architecture. These findings uncover HxD as a previously unrecognized coatomer-targeting motif, highlighting an unexpected flexibility in coronavirus assembly pathways and broadening understanding of the cellular machinery that shapes coronavirus morphogenesis.

Identifiers

PMID41279991
PMCPMC12633080

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.