Evidence map›Paper›PMID 41288356›Full record

ArticleApplied and environmental microbiology2025

The XRE family protein DbuR is a transcriptional repressor of the

Ronnie L Fulton, Diana M Downs

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ronnie L FultonDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.ORCID 0000-0003-2403-6895
Diana M DownsDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.ORCID 0000-0002-1564-6205

Funding

T32 Predoctoral training grant in geneticsT32GM007103 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DYER, KELLY A · 1985 to 2021
$5.9M
Rid family members neutralize endogenous metabolic stressorsR01GM095837 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DOWNS, DIANA M. · 2011 to 2023
$3.7M
Analysis of Metabolic Stress and Functional Integration in ProkaryotesR35GM153189 · NIGMS · UNIVERSITY OF GEORGIA · PI Diana M. Downs · 2024 to 2026
$1.0M
NIGMS NIH HHS R01 GM095837NIGMS NIH HHS R35 GM153189NIGMS NIH HHS R35GM153189NIGMS NIH HHS RO1GM095837NIGMS NIH HHS T32 GM007103NIH HHS T32GM007103
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Bacterial ProteinsD-Amino-Acid OxidaseGene Expression Regulation, BacterialOperonPseudomonas putidaRepressor ProteinsAmino Acids, Branched-ChainTranscription, GeneticTyrosineAmino Acids, Branched-ChainBacterial ProteinsD-Amino-Acid OxidaseRepressor ProteinsTyrosineD-branched chain amino acidsDbuRPseudomonas putidaXRE regulators

Identifiers

PMID41288356
PMCPMC12724383

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.