Evidence map›Paper›PMID 41290991›Full record

ArticleScientific reports2025

Discovery of anti-inflammatory compounds from the stem bark of Garcinia latissima through in vitro and in silico approaches.

Edwin R Sukandar, Nitchakan Darai, Jaruwan Chatwichien, Sutthida Wongsuwan, Sutin Kaennakam, Thitiporn Pattarakankul, Retno Purbowati, Taslim Ersam, Kowit Hengphasatporn, Yasuteru Shigeta and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Edwin R Sukandar *Center of Excellence in Natural Products Chemistry (CENP), Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Nitchakan Darai *Futuristic Science Research Center, School of Science, Walailak University, Nakhon Si Thammarat, 80160, Thailand.
Jaruwan ChatwichienChulabhorn Graduate Institute (CGI), Lak-Si, Bangkok, 10210, Thailand.
Sutthida WongsuwanChulabhorn Graduate Institute (CGI), Lak-Si, Bangkok, 10210, Thailand.
Sutin KaennakamDepartment of Agro-Industrial, Food, and Environmental Technology, Faculty of Applied Science, King Mongkut's University of Technology North Bangkok (KMUTNB), Bangkok, 10800, Thailand.
Thitiporn PattarakankulCenter of Excellence in Materials and Bio-Interfaces, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Retno PurbowatiNatural Products and Synthesis Chemistry Research Laboratory, Department of Chemistry, Faculty of Science, Institut Teknologi Sepuluh Nopember, Surabaya, 60111, Indonesia.
Taslim ErsamNatural Products and Synthesis Chemistry Research Laboratory, Department of Chemistry, Faculty of Science, Institut Teknologi Sepuluh Nopember, Surabaya, 60111, Indonesia.
Kowit HengphasatpornCenter for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan.
Yasuteru ShigetaCenter for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan.
Patipark KueanjindaCenter of Excellence in Immunology and Immune-mediated Diseases, Department of Microbiology, Faculty of Medicine, Chulalongkorn University, Bangkok, 10330, Thailand.
Tanapat PalagaDepartment of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Santi Tip-PyangCenter of Excellence in Natural Products Chemistry (CENP), Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Warinthorn ChavasiriCenter of Excellence in Natural Products Chemistry (CENP), Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Thanyada RungrotmongkolProgram in Bioinformatics and Computational Biology, Graduate School, Chulalongkorn University, Bangkok, 10330, Thailand.
Chanat AonbangkhenCenter of Excellence in Natural Products Chemistry (CENP), Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand. chanat.a@chula.ac.th.

Funding

Ratchadapisek Somphot Fund for Postdoctoral Fellowship Graduate SchoolThailand Science Research and Innovation Fund, Chulalongkorn University (Fundamental Fund) BCG_FF_69_111_2300_029the National Science and Research Fund (NSRF) through the Program Management Unit for Human Resources & Institutional Development, Research and Innovation B38G680006
6 · The paper itself

Abstract

Garcinia latissima Miq. has been traditionally used by local communities in Indonesia for wound healing and to relieve itching. A phytochemical investigation of the stem bark of G. latissima led to the isolation of 12 tocotrienol and triterpenoid derivatives, including two previously undescribed metabolites, δ-(E)-deoxy-amplexichromanoyl acetate (1) and (20S,24S)-20,24-epoxylanostane-3β,25-diol (2), whose structures were elucidated using HRESIMS and NMR spectroscopic analyses. Among the isolates, (20R)-eupha-8,25-diene-3β,24ξ-diol (11) suppressed nitric oxide production in LPS-stimulated RAW 264.7 cells by more than 60% at concentrations of 10 and 50 µM, without significant cytotoxicity (cell viability > 80%). It also reduced the release of several inflammatory mediators, particularly MCP-1, as determined by a membrane antibody array. ELISA confirmed a significant decrease in MCP-1 levels, up to 2.3- and 2.8-fold at 3 and 24 h, respectively, following pre-treatment with compound 11 at 50 µM. Molecular docking and molecular dynamics simulations indicated a strong binding affinity of compound 11 to MD2, TAK1, and NF-κB1, key proteins in the TLR-4 signaling pathway, with predicted affinities higher than those of reference ligands. ADMET analysis further suggested favorable drug-like properties, including high predicted oral bioavailability and minimal toxicity. These findings suggest that compound 11 has promising anti-inflammatory potential, warranting further experimental studies to elucidate its mechanism of action and to validate its effects in additional inflammation-related bioassays.

Indexed as

Anti-Inflammatory AgentsGarciniaPlant BarkPlant ExtractsAnimalsCell SurvivalLipopolysaccharidesMiceMolecular Docking SimulationNitric OxideRAW 264.7 CellsToll-Like Receptor 4Anti-Inflammatory AgentsLipopolysaccharidesNitric OxidePlant ExtractsToll-Like Receptor 4Anti-inflammatoryGarcinia latissimaMCP-1Membrane antibody arrayTocotrienolTriterpenoid

Identifiers

PMID41290991
PMCPMC12820135

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.