Evidence map›Paper›PMID 41292192›Full record

ArticleBiochemistry2025

Distal Mutations Rewire Allosteric Networks to Control Substrate Specificity in PTP1B.

Xiaoyuan Wang, Ryan M Anderson, Jinchan Liu, Victor Batista, J Patrick Loria

Abstract read
In one paragraph

Article in Biochemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiaoyuan WangDepartment of Chemistry, Yale University, New Haven, Connecticut 06511, United States.
Ryan M AndersonDepartment of Chemistry, Yale University, New Haven, Connecticut 06511, United States.ORCID 0009-0004-9853-2458
Jinchan LiuDepartment of Chemistry, Yale University, New Haven, Connecticut 06511, United States.ORCID 0000-0003-2217-1233
Victor BatistaDepartment of Chemistry, Yale University, New Haven, Connecticut 06511, United States.ORCID 0000-0002-3262-1237
J Patrick LoriaDepartment of Chemistry, Yale University, New Haven, Connecticut 06511, United States.ORCID 0000-0002-4824-9089

Funding

PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
Mechanism of catalytic regulation and active site loop motions in related protein tyrosine phosphatasesR01GM112781 · NIGMS · YALE UNIVERSITY · PI LORIA, JOSEPH P · 2015 to 2024
$2.8M
Predoctoral Program in BiophysicsT32GM149438 · NIGMS · YALE UNIVERSITY · PI Yong Xiong, Elsa Chui Ying Yan · 2023 to 2026
$2.6M
NIGMS NIH HHS R01 GM112781NIGMS NIH HHS T32 GM008283NIGMS NIH HHS T32 GM149438
6 · The paper itself

Abstract

Protein tyrosine phosphatase 1B (PTP1B) is a key regulator of cellular signaling pathways, and its dysregulation is linked to diabetes, obesity, cancer, and immune dysfunction. While the catalytic mechanism of PTP1B is conserved across protein tyrosine phosphatases, its regulation by distal allosteric sites remains less understood. Here, we investigate how mutations at four allosteric sites (Y153, I275, M282, and E297) alter the PTP1B substrate specificity and enzymatic dynamics. Kinetic analyses with phosphotyrosine peptides and

Indexed as

MutationProtein Tyrosine Phosphatase, Non-Receptor Type 1Allosteric RegulationAllosteric SiteCatalytic DomainHumansKineticsMolecular Dynamics SimulationSubstrate SpecificityProtein Tyrosine Phosphatase, Non-Receptor Type 1PTPN1 protein, human

Identifiers

PMID41292192
PMCPMC12877921

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.