Evidence mapPaperPMID 41296245Full record

ArticleDiscover oncology2025

Evaluating the carcinogenic potential and molecular mechanisms of 2,3,7,8-tetrachlorodibenzo-p-dioxin in the human stomach using organoids and bulk sequencing data: a multi-machine learning approach combined with computational simulation.

Youfu Tian, Dede Ma, Ke Yan, Bing Xiao, Jie Liu, Miao Tan

Abstract read
In one paragraph

Article in Discover oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Youfu TianDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China.
Dede MaDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China.
Ke YanDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China.
Bing XiaoDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China.
Jie LiuDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China.
Miao TanDepartment of Surgical Oncology, Shaanxi Provincial People's Hospital, Xi'an, 710068, Shaanxi, People's Republic of China. tan20221990@163.com.

Funding

Natural Science Foundation of Shaanxi Province 2024JC-YBQN-0988
6 · The paper itself

Abstract

objectiveThis study investigates the impact of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on the pathogenesis of gastric cancer and its associated molecular mechanisms, particularly the interaction between TCDD and key targets and pathways.

methodsWe employed various machine learning techniques and online databases to perform differential expression analysis on bulk gastric cancer sequencing data and organoid sequencing data to identify target genes and pathways related to TCDD and gastric cancer. A risk prediction model based on the expression levels of key intersection target genes was constructed. Network toxicology and molecular docking techniques were used to study the binding of TCDD to target proteins.

resultsA total of 24 genes were identified as potential target genes related to TCDD-induced gastric cancer. Machine learning analysis identified 5 core target genes as key intersection target genes of TCDD-induced gastric cancer, with the chemical carcinogenesis-receptor activation pathway, p53 signaling pathway, and IL-17 signaling pathway being the key pathways. Molecular docking revealed specific binding effects and binding sites between TCDD and intersection target proteins.

conclusionThis study suggests that TCDD may affect the pathogenesis of gastric cancer by targeting specific genes and pathways. Molecular docking simulations indicate that there is a significant binding specificity effect between TCDD and target proteins, which is key to gastric cancer development.

Indexed as

2,3,7,8-Tetrachlorodibenzo-p-dioxinGastric cancerMachine learningMolecular dockingNetwork toxicology

Identifiers

PMID41296245
PMCPMC12657682

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.