Evidence map›Paper›PMID 41310468›Full record

ArticleBMC cancer2025

Identifying NDUFB2 as a prognostic biomarker for glioblastoma through an exploratory analysis of an anesthesia-related gene signature.

Jingwen Wei, Liyun Zou, Qing Liu, Yubo Xie

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Article in BMC cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Jingwen Wei *Department of Anesthesiology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Liyun Zou *Department of Anesthesiology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Qing LiuDepartment of Anesthesiology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Yubo XieDepartment of Anesthesiology, The First Affiliated Hospital of Guangxi Medical University, Nanning, China. xybdoctor@163.com.

Funding

Guangxi Clinical Research Center for Anesthesiology No. GK AD22035214Guangxi Key Research and Development Program No. AB24010066Special Fund of Neurotoxicity of General Anesthetics and Its Prevention and Treatment Innovation Team of the First Affiliated Hospital of Guangxi Medical University No. YYZS2022001
6 · The paper itself

Abstract

backgroundGlioblastoma (GBM) is the most aggressive primary brain tumor with poor prognosis despite multimodal therapy. Understanding the molecular and genetic characteristics of GBM and the influence of anesthesia drugs on tumor behavior is crucial for developing new therapeutic strategies.

methodsWe analyzed RNA-seq data from The Cancer Genome Atlas (TCGA)-GBM cohort and a Gene Expression Omnibus (GEO) dataset (GSE179004) of GBM samples treated with propofol and sevoflurane. Differential expression analysis identified anesthesia-related genes (ARGs), and their prognostic relevance was assessed using Cox regression. Consensus clustering stratified GBM patients into subgroups with distinct survival outcomes, immune cell infiltration, and pathway activities. An ARGs-based prognostic model was developed using Lasso-Cox regression and validated across cohorts. The hub gene NDUFB2 was identified and validated using single-cell sequencing, drug sensitivity assessment, and spatial transcriptome analysis. NDUFB2 expression levels were experimentally verified in our GBM samples.

resultsARGs were significantly differentially expressed between GBM and normal tissues, with NDUFB2 identified as a hub gene associated with poor prognosis. Consensus clustering divided GBM patients into two subgroups with significant survival differences. An 11-ARGs-based prognostic model was established, demonstrating strong correlation with overall survival. NDUFB2 was predominantly expressed in malignant cells and associated with decreased survival and drug sensitivity.

conclusionsOur study, based on an initial exploratory analysis of anesthesia-related genes (ARGs), highlights their potential prognostic significance in GBM. We propose NDUFB2 as a robust biomarker for prognosis and therapeutic response, supported by extensive validation. These findings offer insights into the molecular classification of GBM and suggest a possible impact of anesthesia drugs on tumor progression, warranting further validation in larger cohorts.

Indexed as

Biomarkers, TumorBrain NeoplasmsGlioblastomaFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMalePrognosisPropofolSevofluraneTranscriptomeBiomarkers, TumorPropofolSevofluraneAnesthesiaGlioblastomaNDUFB2PrognosisTumor microenvironment

Identifiers

PMID41310468
PMCPMC12777021

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.