Evidence map›Paper›PMID 41322562›Full record

ArticleACS omega2025

Targeting SUMOylation with Anacardic Acid Derivatives: Novel Insights into EGF Pathway Dysregulation in Cancer Using an In Silico Approach.

Sandhya Padmakumar, Boinapalli Gopichand, Anu R Melge, Aravind Madhavan, Pradeesh Babu, Bipin G Nair, J Jefferson P Perry, Geetha B Kumar

Abstract read
In one paragraph

Article in ACS omega, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sandhya PadmakumarAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0009-0002-7058-0840
Boinapalli GopichandAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0009-0001-6652-6326
Anu R MelgeAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0000-0002-9593-5006
Aravind MadhavanAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0000-0003-1224-2042
Pradeesh BabuAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0000-0003-0569-6628
Bipin G NairAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0000-0002-4944-8805
J Jefferson P PerryDepartment of Cancer Biology and Molecular Medicine, Beckman Research Institute of City of Hope, Duarte, California 91010, United States.ORCID https://orcid.org/0000-0001-9889-3502
Geetha B KumarAmrita Vishwa Vidyapeetham - Amritapuri Campus, Amrita School of Biotechnology, Amritapuri, Kollam, Kerala 690525, India.ORCID https://orcid.org/0000-0002-4584-6929

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SUMOylation is a critical post-translational modification pathway implicated in various ailments, such as diabetes, neurodegenerative disorders, infectious diseases, and cancer. Dysregulation of SUMOylation affects different hallmarks of cancer, including metastasis, angiogenesis, invasion, and proliferation, making it an important therapeutic target. While anacardic acid (AA) has been shown to inhibit the essential SUMO E1 enzyme (IC50 = 2.1 μM), its clinical potential is limited by high lipophilicity and poor bioavailability, stemming primarily from its C15 alkyl chain. This study is therefore aimed at identifying AA derivatives with improved druggability. Using Mcule, 129 AA derivatives were generated and subjected to molecular docking against SUMO E1, which yielded 61 potential inhibitors based on binding energy. Subsequent virtual screening with SwissADME evaluated their pharmacokinetic properties (solubility, logP, and toxicity), narrowing the candidates to 24 hits. Further analysis identified 2-hydroxy-6-methylbenzoic acid as the top lead compound, demonstrating a superior pharmacokinetic profile. Molecular dynamics simulation studies confirmed its stable binding to SUMO E1 through favorable hydrogen bonding. Previous studies from our laboratory have shown AA to regulate the EGF pathway by inhibiting MMPs directly as well as through its modulators, BSG and TIMP. Based on these observations, GPS SUMO analysis demonstrated potential SUMOylation sites in both BSG and TIMP, which have the potential to be modulated by the lead compound, resulting in regulation of the EGF pathway, thereby controlling cancer progression. These observations strongly support the development of 2-hydroxy-6-methylbenzoic acid and its analogues as potent SUMO E1 inhibitors with enhanced pharmacokinetic profiles for cancer therapy.

Identifiers

PMID41322562
PMCPMC12658823

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.