Evidence mapPaperPMID 41328289Full record

ArticleInternational journal of chronic obstructive pulmonary disease2025

ER Stress-Related Biomarkers in Chronic Obstructive Pulmonary Disease: A Comprehensive Transcriptome, Mendelian Randomization, and Machine-Learning Analysis.

Jiajia Li, Guofeng Li, Junnan Liu, Lijie Li, Huiling Zhou, Xinru Fei, Yuhua Wen, Dongkai Zhao

Abstract read
In one paragraph

Article in International journal of chronic obstructive pulmonary disease, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jiajia LiSchool of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, 130117, People's Republic of China.
Guofeng LiSchool of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, 130117, People's Republic of China.
Junnan LiuDepartment of Respiration, Third Affiliated Hospital to Changchun University of Chinese Medicine, Changchun, Jilin, 130022, People's Republic of China.
Lijie LiDepartment of Respiration, Third Affiliated Hospital to Changchun University of Chinese Medicine, Changchun, Jilin, 130022, People's Republic of China.
Huiling ZhouSchool of Traditional Chinese Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, 130117, People's Republic of China.
Xinru FeiSchool of Rehabilitation Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, 130117, People's Republic of China.
Yuhua WenSchool of Rehabilitation Medicine, Changchun University of Chinese Medicine, Changchun, Jilin, 130117, People's Republic of China.
Dongkai ZhaoDepartment of Respiration, Third Affiliated Hospital to Changchun University of Chinese Medicine, Changchun, Jilin, 130022, People's Republic of China.

Funding

Natural Science Foundation of Jilin Province NO. YDZJ202401121ZYTS
6 · The paper itself

Abstract

Background: Chronic obstructive pulmonary disease (COPD) is a common respiratory disease; however, measures for preventing COPD and delaying disease progression are limited. Therefore, identifying genetic variations and novel biomarkers related to COPD incidence and progression is crucial for improving clinical outcomes. Here, we investigated the potential of the endoplasmic reticulum stress-related gene DNAJB1 as a risk gene in COPD and its clinical value via bioinformatics and Mendelian randomization. Methods: We first performed differential gene analysis on single-cell sequencing datasets then identified candidate genes and genetic loci using Mendelian randomization analysis and co-localization analysis, respectively. Machine-learning analysis of microarray data was used to identify potential biomarkers. Subsequently, we explored the biological role of DNAJB1 through cellular communication, functional enrichment, and correlation analyses with inflammatory factors. Results: DNAJB1 was identified as a risk gene for COPD that shares genetic variants with COPD. Nine key biological genes, including DNAJB1, were identified as potential diagnostic biomarkers. High DNAJB1 expression and high scores for the endoplasmic reticulum stress gene set were validated using the microarray dataset. Conclusion: Our finding reveals DNAJB1 as a COPD risk gene and identifies a diagnostic genetic marker panel, providing useful perspectives for early diagnosis and the development of potential therapeutic targets.

Indexed as

Endoplasmic Reticulum StressHSP40 Heat-Shock ProteinsMachine LearningPulmonary Disease, Chronic ObstructiveTranscriptomeDatabases, GeneticGene Expression ProfilingGenetic MarkersGenetic Predisposition to DiseaseHumansMendelian Randomization AnalysisPhenotypeRisk FactorsGenetic MarkersHSP40 Heat-Shock Proteinsbiomarker genechronic obstructive pulmonary diseaseendoplasmic reticulum stressmachine learningMendelian randomization

Identifiers

PMID41328289
PMCPMC12665228

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.