Evidence map›Paper›PMID 41331190›Full record

ArticleWorld journal of microbiology & biotechnology2025

Comparative analysis of prokaryotic and fungal communities dynamics in Fusarium wilt-infected and healthy tomato rhizospheres at different growth stages.

Aining Guo, Chenfang Wang, Yunyun Chen, Wei Zhang, Jiye Yan, Xuncheng Wang

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aining GuoBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China.
Chenfang WangBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China.
Yunyun ChenBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China.
Wei ZhangBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China.
Jiye YanBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China.
Xuncheng WangBeijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 Shuguanghuayuan Middle Road, Haidian District, 100097, Beijing, China. xuncheng_wang@163.com.

Funding

Outstanding Scientist Project of Beijing Academy of Agriculture and Forestry Sciences JKTD2025002
6 · The paper itself

Abstract

Tomato is severely affected by Fusarium wilt, yet the dynamics of root-associated microbial communities linked to disease across growth stages remain unclear. This study used 16S rDNA and ITS amplicon sequencing to compare the trends in prokaryotic and fungal communities in rhizosphere of healthy and diseased tomato plants at the young and peak fruiting stages. At the young fruiting stage, healthy samples showed higher prokaryotic diversity than diseased ones, but this advantage diminished by the peak fruiting stage; in contrast, fungal diversity remained consistently higher in healthy samples across both stages. LEfSe analysis indicated that the biomarkers in prokaryotic and fungal communities vary between growth stages in healthy samples, whereas diseased samples exhibit a degree of consistency in fungal biomarkers-particularly the pathogens Plectosphaerella, Neocosmospora and Fusarium. Co-occurrence networks revealed that these three pathogens have lower abundance and strong positive correlations during the young fruiting stage, but as their abundance increases at the peak fruiting stage, the positive correlation lost, suggesting altered interactions during disease advancement. These findings uncover growth stage-dependent shifts in rhizosphere microbiome structure and pathogen dynamics during Fusarium wilt development, offering novel insights for designing stage-specific, precision-based disease management strategies in tomato cultivation systems.

Indexed as

BacteriaFungiFusariumPlant DiseasesRhizosphereSolanum lycopersicumMicrobiotaPlant RootsRNA, Ribosomal, 16SSoil MicrobiologyRNA, Ribosomal, 16SDiversityFusarium oxysporumRhizosphere microbiomeTomato Fusarium wilt

Identifiers

PMID41331190

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.