ArticlePlant biotechnology journal2026
Genome and Single-Cell Transcriptome Reveal the Evolution of Holoparasitic Plants: A Case Study of Cistanche deserticola.
Article in Plant biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
1 citing paper in PubMed.
- Single-Cell Insights into Medicinal Plant Development and Metabolism.Plants (Basel, Switzerland) · 2026Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
Abstract
The Orobanchaceae family, the largest group of parasitic plants, spans a complete spectrum from autotrophic to holoparasitic species. As a typical endangered holoparasitic species within this family, Cistanche deserticola is a parasitic plant that is widely harvested for traditional medicine in desertic regions, and of growing importance as a cash crop. However, the evolution of C. deserticola at the molecular and cellular level is poorly understood. Here, we constructed the first chromosome-level genome map of C. deserticola. Comparative genomic analyses demonstrated that the C. deserticola genome exhibited a substantial loss of genes related to photosynthesis and immunity (21.58% of the total genes) and contained 115 horizontally transferred genes. This suggested that the genomic evolution of holoparasitic plants was driven by the interplay between the acquisition of functional genes and the loss of genes specific to plant tissues or functions. Additionally, parasitism-related cells were identified using a high-resolution single-cell transcriptomic atlas, revealing stage-specific differentiation during the parasitic process. Early cells (cluster 11) highly expressed dopamine/tyrosine metabolism pathways genes (e.g., polyphenol oxidase), driving phenylethanoid glycoside biosynthesis. By contrast, mature cells (cluster 10) show high levels of gene expression relating to carbohydrate metabolism in association with nutrient acquisition. Connecting these insights, we developed a comprehensive C. deserticola database to integrate multi-omics and ecological data (http://60.30.67.246:7006/Home). This builds a robust molecular foundation for exploring pathways to parasitism in plants more broadly.
Indexed as
Identifiers
What Socratic holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.