Evidence map›Paper›PMID 41339324›Full record

ArticleNature communications2025

Laminar organization of pyramidal neuron cell types defines distinct CA1 hippocampal subregions.

Maricarmen Pachicano, Shrey Mehta, Angela Hurtado, Tyler Ard, Jim Stanis, Bayla Breningstall, Michael S Bienkowski

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Mapping Projectome Heterogeneity of Subiculum Neuron Cell Types.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maricarmen PachicanoStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-4290-2056
Shrey MehtaStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0009-0002-9353-7781
Angela HurtadoStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0009-0006-4303-3891
Tyler ArdStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0002-5123-1226
Jim StanisStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.
Bayla BreningstallStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0009-0009-6002-1501
Michael S BienkowskiStevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA. bienkows@usc.edu.ORCID http://orcid.org/0000-0002-8231-8893

Funding

USCADRC Diversity Supplement PachicanoP30AG066530 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HELENA Chang CHUI · 2020 to 2026
$27.8M
High Capacity, High Performance Storage System for NeuroscienceS10OD032285 · OD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TOGA, ARTHUR W · 2022 to 2022
$1.7M
A Translational 3D Map of Hippocampal Cell Types To Drive Investigations of Alzheimer's DiseaseK01AG066847 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BIENKOWSKI, MICHAEL · 2021 to 2025
$629k
CA1 cell-type susceptibility in Alzheimer'sR36AG087310 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PACHICANO, MARICARMEN · 2024 to 2024
$52k
National Science Foundation (NSF) OIA-2121164NIA NIH HHS K01 AG066847NIA NIH HHS P30 AG066530NIA NIH HHS R36 AG087310NIH HHS S10 OD032285U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) K01GR1057173U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) P30-AG066530-03S1U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R36AG087310U.S. Department of Health & Human Services | NIH | NIH Office of the Director (OD) S10OD032285
6 · The paper itself

Abstract

Investigating the cell type organization of hippocampal CA1 is essential for understanding its role in memory and cognition and its susceptibility to neurological disorders like Alzheimer's disease and epilepsy. Multiple studies have identified different organizational principles for gene expression and how it reflects cell types within the CA1 pyramidal layer including gradients or mosaic. Here, we identify sublaminar gene expression patterns within the mouse CA1 pyramidal layer that span across the entire hippocampal axis. Our findings reveal that CA1 subregions (CA1d, CA1i, CA1v, CA1vv) contain differentially distributed layers of constituent cell types and can be identified by regional gene expression signatures. This work offers a new perspective on the organization of CA1 cell types that can be used to further explore hippocampal cell types across species.

Indexed as

CA1 Region, HippocampalPyramidal CellsAnimalsFemaleGene Expression ProfilingMaleMiceMice, Inbred C57BL

Identifiers

PMID41339324
PMCPMC12675691

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.