Evidence mapPaperPMID 41339491Full record

ArticleNature immunology2026

Single-cell multi-omic landscape reveals anatomical-specific immune features in adult and pediatric sepsis.

Qian Ye, Xiaofei Lai, Yuliang Liu, Zhengtao Zhang, Yueqiang Fu, Jie Luo, Chengjun Liu, Jun Duan, Hao Ding, Yuhan Liu and 8 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Critical illness expands a transcriptionally distinct hypometabolic CD8bioRxiv : the preprint server for biology · 2026
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Qian Ye *Department of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.ORCID http://orcid.org/0000-0002-6682-6679
Xiaofei Lai *Department of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yuliang Liu *Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Zhengtao Zhang *Department of Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.ORCID http://orcid.org/0000-0002-4370-0045
Yueqiang Fu *Department of Pediatric Intensive Care Unit, Children's Hospital of Chongqing Medical University, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, Chongqing Key Laboratory of Pediatric Metabolism and Inflammatory Diseases, Chongqing, China.
Jie LuoDepartment of Emergency, Chongqing University Central Hospital, Chongqing Emergency Medical Center, Chongqing, China.
Chengjun LiuDepartment of Pediatric Intensive Care Unit, Children's Hospital of Chongqing Medical University, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, Chongqing Key Laboratory of Pediatric Metabolism and Inflammatory Diseases, Chongqing, China.
Jun DuanDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Hao DingDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yuhan LiuDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Zhi AoDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yang TaoDepartment of Critical Care Medicine, Chongqing University Central Hospital, Chongqing Emergency Medical Center, Chongqing, China.
Shanmu AiDepartment of Emergency, Chongqing University Central Hospital, Chongqing Emergency Medical Center, Chongqing, China.
Wei HuangDepartment of Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Lei JiangDepartment of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yi LiuDepartment of Surgery, School of Medicine, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-6592-9262
Fang XuDepartment of Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China. fangxu@hospital.cqmu.edu.cn.ORCID http://orcid.org/0000-0001-8201-1595
Ju CaoDepartment of Laboratory Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China. caoju723@163.com.ORCID http://orcid.org/0000-0002-4855-6986

Funding

National Natural Science Foundation of China (National Science Foundation of China) No. 82370009National Natural Science Foundation of China (National Science Foundation of China) No. 82402513National Natural Science Foundation of China (National Science Foundation of China) No. 82470009
6 · The paper itself

Abstract

The anatomical source of infection is a major determinant of sepsis outcomes; however, how distinct sites shape immunity remains unclear. Here we applied multi-omic profiling, integrating single-cell transcriptomics, single-cell T cell receptor and B cell receptor sequencing, CITE-seq, bulk RNA sequencing and plasma proteomics, to analyze peripheral blood mononuclear cells and plasma from 281 adult and pediatric individuals with sepsis and controls. We identified an NR4A2

Indexed as

SepsisAdolescentAdultAgedChildChild, PreschoolFemaleGene Expression ProfilingHumansInfantMaleMiddle AgedMultiomicsProteomicsSingle-Cell AnalysisTranscriptome

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.