ArticleNature communications2025
Spatial proximity dictates bacterial competition and expansion in microbial communities.
Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
1 citing paper in PubMed.
- Linking spatial drug heterogeneity to microbial growth dynamics in theory and experiment.PLoS computational biology · 2026Article
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10 authors.
Funding
Abstract
In microbial communities, bacteria can inhibit or facilitate each other by altering their shared environment. Most studies of these interactions have focused on well-mixed environments, leaving spatial effects underexplored. Here, we show that in an antibiotic-treated community, bacterial spread depends on a facilitation mechanism that only emerges in spatial settings. The facilitating species enables the community's range expansion but is then suppressed to a minority, making it a hidden initiator of the expansion. Focusing on two pathogens, immotile Klebsiella pneumoniae and motile Pseudomonas aeruginosa, we found that both tolerate a β-lactam antibiotic, with Pseudomonas being more resilient and dominating in well-mixed cultures. During range expansion, however, the antibiotic inhibits Pseudomonas' ability to spread unless it is near Klebsiella-which creates a clear zone by degrading the antibiotic, at the expense of its own growth. As Pseudomonas spreads, it competitively suppresses Klebsiella. Our modeling and experimental analyses reveal that this facilitation operates at a millimeter scale. We also observed similar facilitation by a Bacillus species isolated from a hospital sink, in both pairwise and eight-member bacterial communities with its co-isolates. These findings suggest that spatially explicit experiments are essential to understand certain facilitation mechanisms and have implications for surface-associated microbial communities like biofilms and for polymicrobial infections involving drug-degrading immotile and drug-tolerant motile bacteria.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.