Evidence map›Paper›PMID 41347243›Full record

ArticleFrontiers in microbiology2025

Molecular transmission network analysis of newly diagnosed HIV-1 infections in Ningbo from 2018-2022.

Yue-Qi Yin, Yu-Hui Liu, Jing Zhu, Peng Shen, Yun-Peng Chen, Zhi-Qin Jiang, Hong-Bo Lin, Hong-Xia Ni, Ye-Xiang Sun

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yue-Qi Yin *Department of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Yu-Hui Liu *Ningbo Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Jing ZhuNanjing Jiangning Hospital, Nanjing, Jiangsu, China.
Peng ShenDepartment of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Yun-Peng ChenDepartment of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Zhi-Qin JiangDepartment of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Hong-Bo LinDepartment of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Hong-Xia NiNingbo Center for Disease Control and Prevention, Ningbo, Zhejiang, China.
Ye-Xiang SunDepartment of Data Center, Yinzhou District Center for Disease Control and Prevention, Ningbo, Zhejiang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Understanding molecular transmission patterns is critical for HIV prevention designed with key populations. This study aimed to characterize the molecular epidemiology, transmission networks, and underlying factors associated with HIV-1 transmission in Ningbo during 2018-2022. Methods: We analyzed data from 1,409 newly diagnosed people living with HIV who had successful genotyping. A maximum likelihood phylogenetic tree was constructed, and transmission clusters were identified using 1.3% distance and 0.9 bootstrap values. Multivariate logistic regression was applied to identify factors associated with clustered, large clusters (≥10 nodes) and fast-growing clusters. Results: Molecular analysis revealed 11 distinct HIV-1 subtypes and some unique recombinant forms (URFs), with CRF07_BC (41.6%) and CRF01_AE (33.2%) as the most prevalent. CRF07_BC consistently tended to form larger, more densely connected clusters, whereas CRF01_AE networks primarily exhibited sparse, fragmented distributions. Molecular transmission network analysis identified 9 large clusters and 12 fast-growing clusters. HIV-1 subtypes were associated with the large clusters and fast-growing clusters. CRF07_BC formed larger clusters (aOR = 7.80, 95%CI: 4.70-13.49) and fast-growing clusters (aOR = 6.02, 95%CI: 3.80-9.78) compared to CRF01_AE. Temporally, the molecular transmission networks (MTNs) expanded rapidly in 2020-2021. Conclusion: This study elucidates the MTNs of HIV-1 in Ningbo, highlighting the role of subtype diversity and demographic traits in shaping transmission networks. Continuous monitoring of HIV-1 molecular subtypes among key populations may serve as feasible and focused prevention strategies to curb HIV transmission.

Indexed as

HIV-1molecular transmission networksprevention strategiessubtypetransmission clusters

Identifiers

PMID41347243
PMCPMC12672912

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.