Evidence map›Paper›PMID 41350284›Full record

ArticleNature communications2025

Nucleophosmin 1 lactylation in graft kidney induces ferroptotic trigger waves that exacerbate delayed graft function.

Haitao Yu, Hubin Yin, Yuhua Mei, Xuesong Bai, Chunlin Zhang, Zhenwei Feng, Mao Li, Haonan Chen, Simin Liang, Xin Gou and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Haitao Yu *Department of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.ORCID http://orcid.org/0000-0002-9745-8418
Hubin Yin *Department of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Yuhua Mei *Department of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Xuesong Bai *Department of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Chunlin ZhangDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Zhenwei FengDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Mao LiDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Haonan ChenDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Simin LiangDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.
Xin GouDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China.ORCID http://orcid.org/0000-0003-3062-209X
Wenlong ZhongDepartment of Urology, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, P.R. China. zhongwlong3@mail.sysu.edu.cn.
Weiyang HeDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China. weiyang361@163.com.
Jie LiDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China. beatwind@163.com.
Tianxin LinDepartment of Urology, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, P.R. China. lintx@mail.sysu.edu.cn.ORCID http://orcid.org/0000-0003-3180-8697
Xinyuan LiDepartment of Urology, The First Affiliated Hospital of Chongqing Medical University, Chongqing, P.R. China. lixinyuan@sibcb.ac.cn.ORCID http://orcid.org/0000-0001-8385-8691

Funding

Chongqing Postdoctoral Science Special Foundation 2023CQBSHTB3054Chongqing Science and Technology Commission (Chongqing Science and Technology Commission, Chongqing People's Municipal Government) CSTB2024NSCQ-MSX1030National Natural Science Foundation of China (National Science Foundation of China) 82303655National Natural Science Foundation of China (National Science Foundation of China) 82403698
6 · The paper itself

Abstract

Ferroptotic waves aggravate kidney ischemia-reperfusion injury and drive delayed graft function (DGF). We demonstrate that elevated glycolysis and lactate production in graft kidney correlate with ferroptosis and functional impairment. A signaling axis composed of the long non-coding RNA IGIP-5, microRNA 670-3p, and lactate dehydrogenase A promotes lactate secretion from injured tubular cells, inducing lactylation and ferroptosis in neighboring cells and triggering ferroptotic waves. Lactylome profiling identifies that nucleophosmin 1 (NPM1), an epigenetic regulator, is lactylated at lysine 257 by the lactyltransferase AARS1. Suppressing NPM1 lactylation-via K257 mutation, AARS1 knockout, or taurochenodeoxycholic acid-upregulates SLC7A11 and inhibits ferroptosis. Mechanistically, lactylation stabilizes NPM1 by reducing MDM2-mediated ubiquitination and strengthens SLC7A11 repression, disrupting cystine metabolism. In mouse allografts, blocking lactate shuttle-mediated NPM1 lactylation prevents ferroptotic propagation and ameliorates graft function. Additionally, we develop an early prediction model for DGF using postoperative urinary lactate concentrations. These findings reveal a metabolic-epigenetic axis driving ferroptotic propagation and propose NPM1 lactylation as a therapeutic target for DGF.

Indexed as

Delayed Graft FunctionKidneyKidney TransplantationNuclear ProteinsAnimalsGlycolysisHumansLactic AcidMaleMiceMice, Inbred C57BLMice, KnockoutMicroRNAsNucleophosminReperfusion InjuryRNA, Long NoncodingLactic AcidMicroRNAsNPM1 protein, humanNpm1 protein, mouseNuclear ProteinsNucleophosminRNA, Long Noncoding

Identifiers

PMID41350284
PMCPMC12783763

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.