Evidence map›Paper›PMID 41350997›Full record

ArticleBMC biology2025

Genetic differentiation in domesticated black soldier fly (Hermetia illucens) populations.

Shaktheeshwari Silvaraju, Rebecca Ker Loh, Sandra Kittelmann, Nalini Puniamoorthy

Abstract read
In one paragraph

Article in BMC biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shaktheeshwari SilvarajuDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore. shaktheeshwari.silvaraju@sg.wilmar-intl.com.
Rebecca Ker LohDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore.
Sandra KittelmannWilmar International Limited, 28 Biopolis Road, Singapore, 138568, Singapore.
Nalini PuniamoorthyDepartment of Biological Sciences, National University of Singapore, 16 Science Drive 4, Singapore, 117558, Singapore. nalini@nus.edu.sg.

Funding

Economic Development Board - Singapore A00085100000Ministry of Education - Singapore A00044240000National Research Foundation Singapore A00085140000
6 · The paper itself

Abstract

backgroundThe black soldier fly (BSF, Hermetia illucens) is widely used for waste bioconversion and sustainable protein production. However, domestication and prolonged captive rearing can rapidly alter genetic diversity and population structure. This study investigated how selective breeding, genetic drift, and relaxed selection have shaped genomic variation and effective population size in multiple BSF populations. Using genome-wide restriction site-associated DNA sequencing, we analysed population structure, heterozygosity, and selection signatures across 11 BSF populations, including 1 long-term domesticated line, 5 selectively bred lines (Line A to Line E), 3 wild-derived populations, and 2 commercial strains.

resultsDespite shared origins, lines LA to LE diverged rapidly within 6 years. Principal component analysis and ADMIXTURE clustering (K = 11) revealed that LC to LE retained close genetic affinity, while LA and LB diverged markedly from each other and LC-LE. Demographic reconstructions using Stairway Plot showed that effective population sizes increased during the initial homogenized selective breeding phase (2018-2019) but declined after 2022, consistent with bottlenecks and relaxed selection. Wild-derived populations maintained higher heterozygosity and lower inbreeding coefficients than domesticated lines. Finally, genome-wide analyses identified 133 candidate genes under selection, including signatures of balancing selection and selective sweeps, reflecting divergent evolution under domestication.

conclusionsThese findings demonstrate that genetic differentiation occurs rapidly in BSF populations under domestication, driven by artificial selection, relaxation, genetic drift, and environmental adaptation. These results highlight the need for genetic monitoring in breeding programmes, including maintenance of large founder populations, periodic genetic assessment, and genetic rescue to preserve adaptive potential and reduce inbreeding risks.

Indexed as

DipteraDomesticationGenetic VariationAnimalsGenetic DriftSelection, GeneticBlack soldier flyDomesticationGenomicsHermetia illucensPopulation structureSelective breeding

Identifiers

PMID41350997
PMCPMC12797794

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.