Evidence map›Paper›PMID 41370448›Full record

ArticleCancer research communications2026

Transcriptomic Analyses of Normal Human Pancreata Reveal the Presence of Cancer Subtypes that Correlate with Acinar Ductal Metaplasia and Donor Ancestry.

Corey M Perkins, Jinmai Jiang, Kalyanee Shirlekar, Zachary Greenberg, Md Abu Talha Siddique, Jason Brant, Kiley Graim, Mei He, Sarah Kim, Diana J Wilkie and 7 more

Abstract read
In one paragraph

Article in Cancer research communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Corey M Perkins *Department of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0002-5669-4772
Jinmai Jiang *Department of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0002-2418-6781
Kalyanee ShirlekarFlorida-California Cancer Research Education and Engagement Health Equity Center.ORCID 0009-0007-2167-0766
Zachary GreenbergDepartment of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0001-9626-2694
Md Abu Talha SiddiqueDepartment of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0009-0009-0667-0471
Jason BrantFlorida-California Cancer Research Education and Engagement Health Equity Center.ORCID 0000-0002-9800-9251
Kiley GraimDepartment of Computer & Information Science & Engineering, Herbert Wertheim College of Engineering, University of Florida, Gainesville, Florida.ORCID 0000-0002-4569-8444
Mei HeDepartment of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0001-5316-9326
Sarah KimDepartment of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0002-9179-0735
Diana J WilkieFlorida-California Cancer Research Education and Engagement Health Equity Center.ORCID 0000-0002-3954-8933
Bo HanFlorida-California Cancer Research Education and Engagement Health Equity Center.ORCID 0000-0003-1458-4265
Jamel AliFlorida-California Cancer Research Education and Engagement Health Equity Center.ORCID 0000-0002-2997-1981
Pascal BelleauSimons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.ORCID 0000-0002-0802-1071
Astrid DeschênesCancer Center, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.ORCID 0000-0001-7846-6749
Alexander KrasnitzSimons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.ORCID 0000-0002-9465-0308
Mazhar KanakDepartment of Transplant Surgery, Virginia Commonwealth University, Richmond, Virginia.ORCID 0000-0003-3058-4687
Thomas D SchmittgenDepartment of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida.ORCID 0000-0002-2812-8546

Funding

The Human Islet Distribution Coordinating Center (UC4)UC4DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI EVANS-MOLINA, CARMELLA, NILAND, JOYCE CAROL · 2012 to 2017
$25.6M
Tissue Modeling & Drug Development Shared Resources CoreU54CA233444 · NCI · UNIVERSITY OF FLORIDA · PI Chanita A. Hughes-Halbert, Tianze Jiao · 2018 to 2026
$12.1M
Tissue Modeling CoreU54CA233465 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JOYCE M RICHEY · 2018 to 2026
$11.9M
University of Florida Health Cancer Center Support GrantP30CA247796 · NCI · UNIVERSITY OF FLORIDA · PI Alison Ivey · 2023 to 2026
$10.9M
Tissue Modeling CoreU54CA233396 · NCI · FLORIDA AGRICULTURAL AND MECHANICAL UNIV · PI Gebre-Egziabher Kiros · 2018 to 2026
$9.8M
Novel Targeted Anticancer Agents from Marine CyanobacteriaR01CA172310 · NCI · UNIVERSITY OF FLORIDA · PI HENDRIK LUESCH · 2013 to 2026
$5.8M
Computational tools for accurate inference of genetic ancestry from cancer-derived molecular dataU01CA289357 · NCI · COLD SPRING HARBOR LABORATORY · PI ALEXANDER KRASNITZ · 2024 to 2026
$1.5M
National Cancer Institute (NCI) 5U01CA289357-02National Cancer Institute (NCI) CA172310-08S1National Cancer Institute (NCI) P30CA247796National Cancer Institute (NCI) U54CA233396National Cancer Institute (NCI) U54CA233444National Cancer Institute (NCI) U54CA233465NCI NIH HHS P30 CA247796NCI NIH HHS R01 CA172310NCI NIH HHS U01 CA289357NCI NIH HHS U54 CA233396NCI NIH HHS U54 CA233444NCI NIH HHS U54 CA233465NIDDK NIH HHS UC4 DK098085
6 · The paper itself

Abstract

Molecular subtypes exist in pancreatic ductal adenocarcinoma (PDAC); however, comparable subtypes are not known to exist in normal pancreas. A large, racially diverse cohort of normal, human pancreatic acinar cells was obtained from islet transplantation centers. RNA isolated from uncultured acini and those acini that had undergone acinar ductal metaplasia (ADM) was sequenced. Data analysis from 69 uncultured, normal acini showed two clusters of samples, one that aligns with exocrine-resembling tissue (ERT) signatures and another with the classical and basal (C/B) subtypes. Gene expression associated with the ERT signature decreased following 6 days of ADM transdifferentiation, whereas those assigned to the C/B subtype increased. Subtype classification findings were confirmed in two independent cohorts of transcriptomic data of normal pancreas. A direct correlation exists between ancestral admixture and the molecular index of ADM; those specimens with higher African ancestral admixture showed a greater propensity for ADM compared with those with a higher Ameridigenous admixture. The extent of morphologic ADM decreased in the order of Black > White > Hispanic race. Analysis of associated metadata revealed that potential confounders such as diabetes, obesity, age, gender, or specimen handling and processing variables did not influence the distribution of samples across subtype classification. We report that normal human pancreatic acinar tissues group into molecular subtypes like those used to classify PDAC and that subtype assignment and ADM are influenced by the donor's race. SIGNIFICANCE: Human tissue models provide direct insights into human pancreatic biology and preserve the donor-to-donor heterogeneity present in the general population. By utilizing these models, our study suggests that a subset of normal pancreata exhibits a preexisting permissive state that renders acinar cells more susceptible to early reprogramming and ADM.

Indexed as

Acinar CellsCarcinoma, Pancreatic DuctalPancreasPancreatic NeoplasmsTranscriptomeAdultAgedFemaleGene Expression ProfilingHumansMaleMetaplasiaMiddle Aged

Identifiers

PMID41370448
PMCPMC12820465

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.