Evidence map›Paper›PMID 41373739›Full record

ArticleInternational journal of molecular sciences2025

Intratumoral Microbiota Correlates with AP-2 Expression: A Pan-Cancer Map with Cohort-Specific Prognostic and Molecular Footprints.

Damian Kołat, Piotr Gromek, Lin-Yong Zhao, Żaneta Kałuzińska-Kołat, Mateusz Kciuk, Renata Kontek, Elżbieta Płuciennik

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Damian KołatDepartment of Functional Genomics, Medical University of Lodz, 90-752 Lodz, Poland.ORCID 0000-0002-1086-3796
Piotr GromekDepartment of Functional Genomics, Medical University of Lodz, 90-752 Lodz, Poland.ORCID 0009-0005-8093-8481
Lin-Yong ZhaoDepartment of General Surgery, West China Hospital, Sichuan University, Chengdu 610041, China.
Żaneta Kałuzińska-KołatDepartment of Functional Genomics, Medical University of Lodz, 90-752 Lodz, Poland.ORCID 0000-0002-2335-3293
Mateusz KciukDepartment of Functional Genomics, Medical University of Lodz, 90-752 Lodz, Poland.ORCID 0000-0002-8616-3825
Renata KontekDepartment of Molecular Biotechnology and Genetics, University of Lodz, 90-237 Lodz, Poland.ORCID 0000-0003-2859-9839
Elżbieta PłuciennikDepartment of Functional Genomics, Medical University of Lodz, 90-752 Lodz, Poland.ORCID 0000-0002-6682-0402

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The AP-2 family is a group of key regulators in cancer, yet their relationship with intratumoral microbes remains undefined. The present pan-cancer workflow leveraged TCGA transcriptomic data to correlate expression of AP-2 representatives with bacterial abundance on the genus and species level, followed by cohort-specific survival modeling, clinical profiling, differential expression, weighted co-expression analysis, and chromatin proximity tests with AP-2 enrichment. Significant correlations between microbiota and AP-2 were observed in 18 of 33 analyzed tumor types;

Indexed as

MicrobiotaNeoplasmsTranscription Factor AP-2Cohort StudiesGene Expression Regulation, NeoplasticHumansPrognosisTranscriptomeTranscription Factor AP-2adrenocortical carcinomaAP-2bioinformaticsdiffuse large B-cell lymphomamicrobiotapan-cancerprognosisstomach adenocarcinomaTFAP2BTFAP2E

Identifiers

PMID41373739
PMCPMC12692072

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.