Evidence map›Paper›PMID 41388504›Full record

ArticleInternational endodontic journal2026

Exploring Persistent Apical Periodontitis in Humans: Integrative Genetic, Histological and Microbiological Perspectives for Translational Research.

Igor Bassi Ferreira Petean, Alice Corrêa Silva-Sousa, Rafael Verardino de Camargo, Yara Terezinha Corrêa Silva-Sousa, Fernanda Gonçalves Basso, André Pitondo-Silva, Francisco Wanderley Garcia de Paula-Silva, Erika Calvano Kuchler, Raquel Assed Bezerra da Silva, Lea Assed Bezerra da Silva and 3 more

Abstract read
In one paragraph

Article in International endodontic journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Igor Bassi Ferreira PeteanDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-2704-5730
Alice Corrêa Silva-SousaDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-9931-0935
Rafael Verardino de CamargoDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-6546-9980
Yara Terezinha Corrêa Silva-SousaFaculty of Dentistry, University of Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-7671-1656
Fernanda Gonçalves BassoFaculty of Dentistry, University of Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-7170-2371
André Pitondo-SilvaFaculty of Dentistry, University of Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0003-0098-9667
Francisco Wanderley Garcia de Paula-SilvaDepartment of Paediatric Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0001-8559-532X
Erika Calvano KuchlerDepartment of Orthodontics, Medical Faculty, University Hospital Bonn, Bonn, Germany.ORCID https://orcid.org/0000-0001-5351-2526
Raquel Assed Bezerra da SilvaDepartment of Paediatric Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-0230-1347
Lea Assed Bezerra da SilvaDepartment of Paediatric Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.ORCID https://orcid.org/0000-0001-7118-6859
Jardel Francisco Mazzi-ChavesDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-9889-1790
Fabiane Carneiro Lopes-OlhêDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0003-4375-3371
Manoel Damião Sousa-NetoDepartment of Restorative Dentistry, School of Dentistry of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-7696-7600

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 33002029032P4Fundação de Amparo à Pesquisa do Estado de São Paulo 2018/21130-3
6 · The paper itself

Abstract

aimTo evaluate the impact of polymorphisms in SOCS-1, TNF-α and RANKL on gene expression of RANK, RANKL, TNFRSF1, SOCS-1, IL-10, IL-1β and TNF-α, and to evaluate the histopathological, immunohistochemical and microbiological aspects of persistent apical periodontitis (PAP) after root canal treatment (RCT) in Brazilian individuals. METHODOLOGY: Patients with pulp necrosis and apical periodontitis at the time of the non-surgical RCT (NSRCT) were followed up for at least 1 year after NSRCT. In view of the need for surgical intervention (cases assessed with a CBCTPAI score of 4 and 5, with the presence of symptoms), 20 patients were selected for endodontic surgery, which was planned using cone beam computed tomography images. Initially, saliva was collected as a source of genomic DNA, and the individuals were genotyped for SOCS-1, TNF-α and RANKL polymorphisms by real-time PCR. After collecting the biological material, the periapical lesions obtained were subjected to analysis of gene expression levels for RANK, RANKL, TNFRSF1, SOCS-1, IL-10, IL-1β and TNF-α, and histopathological evaluation for characterisation and differentiation into periapical granulomas and cysts; immunohistochemical evaluation for SOCS-1 and IL-1β protein labeling; and microbiological analysis to identify the microorganisms involved in persistent periapical infection. The relative mRNA expression values of each gene in each group, according with genotypes in different SNPs, were analysed using one-way analysis of variance followed by Tukey's post-test or T-test (α = 5%).

resultsDifferent expression values of the genes evaluated were observed according to the genotypes of the polymorphisms evaluated in relation to PAP (p < 0.05). Among the cases submitted for histopathological evaluation, 66.7% were diagnosed as periapical granuloma and 33.3% as periapical cyst. Immunohistochemical analysis showed strong positivity for SOCS-1 and IL-1β in the lesions classified as periapical cyst, while the lesions diagnosed as periapical granuloma were not labelled. In the microbiological analysis, four different species of bacteria were isolated: Pseudomonas aeruginosa, Staphylococcus epidermidis, Enterococcus faecalis and Bacillus cereus.

conclusionsThis exploratory study indicates that genetic polymorphisms can modulate gene expression and protein activity in PAP, shaping the host's inflammatory and reparative response. These findings highlight their potential as biomarkers and establish a basis for future translational studies.

Indexed as

Periapical PeriodontitisAdultBrazilDental Pulp NecrosisFemaleGenotypeHumansInterleukin-10Interleukin-1betaMaleMiddle AgedRANK LigandReal-Time Polymerase Chain ReactionReceptor Activator of Nuclear Factor-kappa BRoot Canal TherapySuppressor of Cytokine Signaling 1 ProteinInterleukin-10Interleukin-1betaRANK LigandReceptor Activator of Nuclear Factor-kappa BSOCS1 protein, humanSuppressor of Cytokine Signaling 1 ProteinTNFSF11 protein, humanTumor Necrosis Factor-alphaapical periodontitisbone metabolismgene expressiongenetic polymorphismshistopathological analysis

Identifiers

PMID41388504
PMCPMC12884208

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.