Evidence map›Paper›PMID 41404662›Full record

ArticleACS synthetic biology2026

InSillyClo, a User-Friendly Web Application to Assist Large-Scale Golden Gate Cloning and MoClo Workflows.

Henri Galez, Bryan Brancotte, Juliette Bonche, Julien Fumey, Sara Napolitano, Gregory Batt

Abstract read
In one paragraph

Article in ACS synthetic biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Henri GalezInstitut Pasteur, Inria, Université Paris Cité, 75015 Paris, France.
Bryan BrancotteInstitut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, 75015 Paris, France.
Juliette BoncheInstitut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, 75015 Paris, France.
Julien FumeyInstitut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, 75015 Paris, France.ORCID 0000-0002-6272-5619
Sara NapolitanoInstitut Pasteur, Inria, Université Paris Cité, 75015 Paris, France.ORCID 0000-0001-5040-3391
Gregory BattInstitut Pasteur, Inria, Université Paris Cité, 75015 Paris, France.ORCID 0000-0003-1697-139X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Systems and synthetic biology developments often require the construction of many variants of a genetic circuit of interest, resulting in large-scale cloning campaigns. Golden Gate and Modular Cloning (MoClo), two powerful technologies enabling the scale-up of cloning workflows, play a central role for efficient circuit construction. These workflows include a number of dry-lab tasks, which are time-consuming and error-prone at scale. Currently, no software tool is available to handle these tasks in a dedicated, time-saving, and user-friendly manner. We present InSillyClo, an open-source web application to assist large-scale Golden Gate cloning and MoClo workflows. It supports an easy specification of genetic designs at any scale, followed by the automated generation of comprehensive workflow-related data. Moreover, InSillyClo leverages Modular Cloning with a versatile typing system of parts to generate user-defined workflows. InSillyClo is open source, accessible with or without user registration, and can also be used locally.

Indexed as

Cloning, MolecularSoftwareSynthetic BiologyInternetWorkflowcloning companion softwareflexible MoClo supportgenetic circuit designgolden gatelab automationopen-source software

Identifiers

PMID41404662
PMCPMC12814555

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.