Evidence map›Paper›PMID 41430723›Full record

ArticleGenome medicine2025

Airway transcriptome networks for ozone and PM

Yoojin Chun, Haritz Irizar, Lingdi Zhang, Kyle Reed, Galina Grishina, Alexander Grishin, Alfin Vicencio, Supinda Bunyavanich

Abstract read
In one paragraph

Article in Genome medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yoojin ChunDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Haritz IrizarCenter for Biostatistics, Icahn School of Medicine at Mount Sinai, Population Health Science and Policy, 1425 Madison Avenue, # 1498, New York, NY, 10029, USA.
Lingdi ZhangDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Kyle ReedDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Galina GrishinaDivision of Allergy & Immunology, Department of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alexander GrishinDivision of Allergy & Immunology, Department of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alfin VicencioDivision of Pulmonology, Department of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Supinda BunyavanichDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. supinda@post.harvard.edu.

Funding

Nasal biomarkers of asthmaR01AI118833 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BUNYAVANICH, SUPINDA · 2015 to 2019
$3.8M
NIAID NIH HHS R01 AI118833NIH HHS R01 AI 118833
6 · The paper itself

Abstract

backgroundAir pollution disproportionately affects individuals with asthma, triggering asthma exacerbations and morbidity. We hypothesized that children with and without asthma have distinct airway transcriptome networks associated with ozone and particulate matter ≤ 2.5 µm (PM

methodsWe recruited children from the New York metropolitan area, mapped their air pollutant exposures, and collected nasal and bronchial samples for transcriptome and cellular profiling. We used causal network construction and key driver analyses to build airway transcriptome networks for ozone and PM

resultsThe cohort included 307 children, including 167 (54.4%) with asthma and 140 (45.6%) without asthma. The mean age was 13.4 years (SD 4.4 years). Among children with asthma, the airway causal network and its key drivers represented pro-inflammatory adaptive immune processes. Six key driver transcripts for ozone (CLC, CPA3, FGL2, LGALS12, IL7R, HRH4) and three key driver transcripts for PM

conclusionChildren with and without asthma have very distinct causal networks and key drivers for ozone and PM

Indexed as

Air PollutantsAsthmaEnvironmental ExposureGene Regulatory NetworksOzoneParticulate MatterTranscriptomeAdolescentAir PollutionChildFemaleGene Expression ProfilingHumansMaleAir PollutantsOzoneParticulate MatterAdaptive immuneAir pollutionAirwayAsthmaBronchialDNA repairNasalOzonePM2.5Transcriptome

Identifiers

PMID41430723
PMCPMC12723882

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.