Evidence map›Paper›PMID 41454176›Full record

ArticleScientific reports2025

Effects of environmental factors on arsenic accumulation in rice under field conditions using a Bayesian state space model.

Kochi Ishito, Ikuko Akahane, Shigeki Kishi, Koji Baba, Noriko Yamaguchi, Keisuke Ono, Ken Nakamura, Satoru Ishikawa

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kochi Ishito *Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Ikuko Akahane *Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Shigeki KishiResearch Center for Agricultural Information Technology, NARO, 1-31-1 Kannondai, Tsukuba, Ibaraki, 305-0856, Japan.
Koji BabaResearch Center for Advanced Analysis, NARO, Tsukuba, Japan.
Noriko YamaguchiInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Keisuke OnoInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Ken NakamuraInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Satoru IshikawaInstitute for Agro-Environmental Sciences, National Agriculture and Food Research Organization (NARO), 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan. ishikawa.satoru519@naro.go.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice (Oryza sativa L.) is a major dietary source of arsenic (As) for humans. Understanding the mechanisms of As accumulation in rice is essential for mitigating human exposure. However, the effects of environmental factors on As accumulation in rice have been insufficiently quantified under field conditions. To address these issues, we modeled temporal dynamics of As accumulation in rice plants and grains using a Bayesian state-space model (SSM). In this SSM, As concentrations in flag leaves and rice grains were treated as response variables, whereas four environmental factors, i.e., number of flooding days, temperature, crop evapotranspiration and precipitation, served as explanatory variables. The nonlinear effects of physiological factors were also incorporated into the SSM. The results indicated that among the four environmental factors, flooding days exerted the greatest positive effect on As accumulation in rice plants, with the effect peaking 5-10 days after heading. High temperatures and increased crop evapotranspiration promoted As accumulation, whereas increased precipitation reduced As accumulation. This work is among the first studies to quantify the effects of environmental factors on As accumulation in rice under field conditions, and the findings contribute to the development of region-specific cultivation guidelines for mitigating As exposure through rice.

Indexed as

ArsenicOryzaSoil PollutantsBayes TheoremPlant LeavesTemperatureArsenicSoil PollutantsArsenicBayesian statisticsRiceState–space modelTime series analysis

Identifiers

PMID41454176
PMCPMC12864984

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.