Evidence map›Paper›PMID 41454218›Full record

ArticleBMC medical imaging2025

LoRA-based methods on Unet for transfer learning in aneurysmal subarachnoid hematoma segmentation.

Cristian Minoccheri, Matthew Hodgman, Haoyuan Ma, Rameez Merchant, Emily Wittrup, Craig Williamson, Kayvan Najarian

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Article in BMC medical imaging, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

7 authors.

Cristian Minoccheri *Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, 1109 Geddes Avenue, Arbor, MI, 48104, USA. minoc@umich.edu.
Matthew Hodgman *Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, 1109 Geddes Avenue, Arbor, MI, 48104, USA. hodgman@umich.edu.
Haoyuan MaGilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, 1109 Geddes Avenue, Arbor, MI, 48104, USA.
Rameez MerchantDepartment of Neurosurgery, University of Michigan, 1109 Geddes Avenue, Ann Arbor, MI, 48104, USA.
Emily WittrupGilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, 1109 Geddes Avenue, Arbor, MI, 48104, USA.
Craig WilliamsonDepartment of Neurosurgery, University of Michigan, 1109 Geddes Avenue, Ann Arbor, MI, 48104, USA.
Kayvan NajarianGilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, 1109 Geddes Avenue, Arbor, MI, 48104, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAneurysmal subarachnoid hemorrhage (SAH) is a life-threatening neurological emergency with mortality rates exceeding 30%. While deep learning techniques show promise for automated SAH segmentation, their clinical application is limited by the scarcity of labeled data and challenges in cross-institutional generalization. Transfer learning from related hematoma types represents a potentially valuable but underexplored approach. Although Unet architectures remain the gold standard for medical image segmentation due to their effectiveness on limited datasets, Low-Rank Adaptation (LoRA) methods for parameter-efficient transfer learning have been rarely applied to convolutional neural networks in medical imaging contexts. The importance of SAH diagnosis and the time-intensive nature of manual annotation would benefit from automated solutions that can leverage existing multi-institutional datasets from more common conditions.

methodsWe implemented a Unet architecture pre-trained on computed tomography scans from 124 traumatic brain injury patients across multiple institutions, then fine-tuned on 30 aneurysmal SAH patients from the University of Michigan Health System using 3-fold cross-validation. We developed a novel CP-LoRA method based on tensor canonical polyadic (CP) decomposition and introduced DoRA variants (DoRA-C, convDoRA, CP-DoRA) that decompose weight matrices into magnitude and directional components. We compared these approaches against existing LoRA methods (LoRA-C, convLoRA) and standard fine-tuning strategies across different modules on a multi-view Unet model. Performance was evaluated using Dice scores stratified by hemorrhage volume, with additional assessment of predicted versus annotated blood volumes.

resultsTransfer learning from traumatic brain injury to aneurysmal SAH demonstrated feasibility with all fine-tuning approaches achieving superior performance compared to no fine-tuning (mean Dice 0.410 ± 0.26). The best-performing traditional approach was decoding module fine-tuning (Dice 0.527 ± 0.20). LoRA-based methods consistently outperformed standard Unet fine-tuning, with DoRA-C at rank 64 achieving the highest overall performance (Dice 0.572 ± 0.17). Performance varied by hemorrhage volume, with all methods showing improved accuracy for larger volumes (Dice 0.682-0.694 for volumes > 100 mL vs. Dice 0.107-0.361 for volumes < 25 mL). CP-LoRA achieved comparable performance to existing methods while using significantly fewer parameters. Over-parameterization with higher ranks (64-96) consistently yielded better performance than strictly low-rank adaptations.

conclusionsThis study demonstrates that transfer learning between hematoma types is feasible and that LoRA-based methods significantly outperform conventional Unet fine-tuning for aneurysmal SAH segmentation. The novel CP-LoRA method offers parameter efficiency advantages, while DoRA variants provide superior segmentation accuracy, particularly for small-volume hemorrhages. The finding that over-parameterization improves performance challenges traditional low-rank assumptions and suggests clinical applications may benefit from higher-rank adaptations. These results support the potential for automated SAH segmentation systems that leverage large multi-institutional traumatic brain injury datasets, potentially improving diagnostic speed and consistency when specialist expertise is unavailable.

Indexed as

Deep LearningHematomaSubarachnoid HemorrhageTomography, X-Ray ComputedFemaleHumansMaleNeural Networks, ComputerArtificial intelligenceDoRALoRASegmentationSubarachnoid hematomaTransfer learningUnet

Identifiers

PMID41454218
PMCPMC12849090

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.