Evidence map›Paper›PMID 41465220›Full record

ArticleInternational journal of molecular sciences2025

Integrative Transcriptomic and Machine-Learning Analysis Reveals Immune-Inflammatory and Stress-Response Alterations in MRONJ.

Galina Laputková, Ivan Talian, Ján Sabo

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Galina LaputkováDepartment of Medical and Clinical Biophysics, Faculty of Medicine, Pavol Jozef Šafárik University, 040 11 Košice, Slovakia.ORCID 0000-0001-7152-693X
Ivan TalianDepartment of Medical and Clinical Biophysics, Faculty of Medicine, Pavol Jozef Šafárik University, 040 11 Košice, Slovakia.ORCID 0000-0002-9698-6024
Ján SaboDepartment of Medical and Clinical Biophysics, Faculty of Medicine, Pavol Jozef Šafárik University, 040 11 Košice, Slovakia.

Funding

Scientific Grant Agency of the Ministry of Education, Research, Development and Youth of the Slovak Republic and the Slovak Academy of Sciences VEGA 1/0186/25
6 · The paper itself

Abstract

Medication-related osteonecrosis of the jaw (MRONJ) is a serious adverse effect of antiresorptive and antiangiogenic therapies, yet its molecular mechanisms remain poorly defined. The present study employed an analysis of microarray data (GSE7116) from peripheral blood mononuclear cells of patients with multiple myeloma, myeloma patients with MRONJ, and healthy controls. Differentially expressed genes were identified using the limma package, followed by functional enrichment analysis, weighted gene co-expression network analysis, and LASSO regression and CytoHubba network ranking. The predictive performance was validated by means of nested cross-validation, Firth logistic regression, and safe stratified 0.632+ bootstrap ridge regression. The profiling revealed distinct gene expression patterns between the groups: the upregulation of ribosomal and translational pathways, as well as the suppression of neutrophil degranulation and antimicrobial defense mechanisms, and identified key candidate genes, including

Indexed as

InflammationMachine LearningStress, PhysiologicalTranscriptomeGene Expression ProfilingGene Regulatory NetworksHumansLeukocytes, MononuclearMultiple Myelomabiomarkersimmune dysregulationMRONJstress responsetranscriptomicsWGCNA

Identifiers

PMID41465220
PMCPMC12732740

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.