Evidence map›Paper›PMID 41475845›Full record

ArticleJournal for immunotherapy of cancer2025

Single-cell and spatial transcriptome profiling identifies the immunosuppressive spatial niche in

Sheng Yang, Chao Gu, Xinsheng Miao, Hao Zuo, Wei Xu, Yan Zhang, Wei Tang, Jianhua Zhu, Zheng Yuan, Xinhua Gu and 3 more

Abstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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  4. Article
  5. Article
  6. Review
  7. Article
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  9. Review
  10. Article
  11. Article
  12. CTHRC1Frontiers in immunology · 2026
    Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sheng YangDepartment of General Surgery, The Third Affiliated Hospital of Nanjing Medical University, Changzhou, China.ORCID http://orcid.org/0009-0006-5815-9307
Chao GuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.ORCID http://orcid.org/0000-0002-0486-8611
Xinsheng MiaoDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Hao ZuoDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Wei XuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Yan ZhangDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Wei TangDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Jianhua ZhuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Zheng YuanDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Xinhua GuDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China.
Chenyi ZhongCenter for Human Reproduction and Genetics, Suzhou Municipal Hospital, Suzhou, Jiangsu, China zhoujiahui@njmu.edu.cn sunyueming@njmu.edu.cn zhongchenyi0702@njmu.edu.cn.ORCID http://orcid.org/0000-0001-9951-8878
Yueming SunDepartment of General Surgery, The Third Affiliated Hospital of Nanjing Medical University, Changzhou, China zhoujiahui@njmu.edu.cn sunyueming@njmu.edu.cn zhongchenyi0702@njmu.edu.cn.ORCID http://orcid.org/0000-0001-8641-1668
Jiahui ZhouDepartment of Gastrointestinal Surgery, Suzhou Municipal Hospital, Suzhou, Jiangsu, China zhoujiahui@njmu.edu.cn sunyueming@njmu.edu.cn zhongchenyi0702@njmu.edu.cn.ORCID http://orcid.org/0009-0009-8247-2186

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

methodsTo investigate this heterogeneity, we employed single-cell RNA sequencing and spatial transcriptomics to comprehensively characterize the tumor microenvironment of

resultsOur analyses revealed that

conclusionThese cellular components collaboratively established an immunosuppressive spatial niche. These findings offer novel theoretical insights and potential targets for the development of immunoregulatory strategies tailored to

Indexed as

Colorectal NeoplasmsProto-Oncogene Proteins p21(ras)Single-Cell AnalysisTumor MicroenvironmentGene Expression ProfilingHumansMutationTranscriptomeKRAS protein, humanProto-Oncogene Proteins p21(ras)Colorectal CancerImmunosuppressionTumor microenvironment - TME

Identifiers

PMID41475845
PMCPMC12766835

What Socratic holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.