Evidence map›Paper›PMID 41495779›Full record

ArticleMolecular horticulture2026

Integrated genome-wide domestication and association analyses reveal the complex genetic basis of parthenocarpy during cucumber domestication.

Pinyu Zhu, Shiyou Wang, Yongjiao Meng, Weiping Diao, Xiaqing Yu, Yuhui Wang, Ji Li, Jinfeng Chen

Abstract read
In one paragraph

Article in Molecular horticulture, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pinyu ZhuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China.
Shiyou WangState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China.
Yongjiao MengState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China.
Weiping DiaoJiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Institute of Vegetable Crops, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Xiaqing YuState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China.
Yuhui WangState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China.
Ji LiState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China. liji1981@njau.edu.cn.
Jinfeng ChenState Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Horticulture, Nanjing Agricultural University, Weigang Campus, Nanjing, 210095, China. jfchen@njau.edu.cn.

Funding

Jiangsu Province Key Research and Development Plan Modern Agriculture Project BE2023349Key Research and Development Program of Hunan Province of China 2020YFE0202900National Natural Science Foundation of China 32272726
6 · The paper itself

Abstract

Parthenocarpy is an important target trait for the yield and quality of fruit crops. It has been used and selected in cucumber breeding for more than a hundred years, which has led to variation in parthenocarpic ability among different cucumber groups and thus resulted in a complex genetic basis. Here, we performed deep resequencing of 236 cucumbers from six cucumber groups and investigated parthenocarpic phenotypes over three years and six seasons to explore the genetic basis of parthenocarpy in cucumber. Among the 34 loci associated with parthenocarpy identified through a genome-wide association study (GWAS), 17 (50%) were correlated with reported quantitative trait loci (QTLs), and 27 (79.4%) were selected during cucumber domestication. We found that favorable parthenocarpic alleles continuously accumulated in cultivated cucumbers, and our data pinpoint that different favorable alleles were selected in the cucumber groups, leading to variations in parthenocarpic ability among them. To validate the favorable alleles detected by GWAS, we cloned three genes, CsACA10, CsCaM, and CsERT2, and verified their roles in the regulation of parthenocarpy for the first time. Our study elucidated the genetic basis and molecular mechanism of parthenocarpy, providing important germplasms for improving parthenocarpy in cucumber breeding.

Indexed as

CucumberDomesticationGenetic basisGWASParthenocarpy

Identifiers

PMID41495779
PMCPMC12777003

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.