Evidence map›Paper›PMID 41524900›Full record

ArticleCurrent microbiology2026

Comparative Transcriptome Analysis Revealed Candidate Genes Involved in Fruiting Body Development in the culinary-medicinal Mushroom Pleurotus tuber-regium.

Caiyun Long, Dongmei Liu, Ting Hu, Gong Chen, Xueyan Sun, Xihong Zhao

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Current microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Caiyun LongHubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemistry Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205, China.
Dongmei LiuJiangsu Key Laboratory for Conservation and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, 210014, China.
Ting HuHubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemistry Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205, China.
Gong ChenHubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemistry Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205, China.
Xueyan Sun *Hubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemistry Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205, China. xueysun2022@126.com.ORCID http://orcid.org/0000-0003-4728-1201
Xihong Zhao *Hubei Key Laboratory of Microbial Transformation and Regulation of Biogenic Elements in the Middle Reaches of the Yangtze River, Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemistry Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205, China. xhzhao2006@gmail.com.

Funding

Cultivation Fund of the Key Scientific and Technical Innovation Project, Ministry of Education Q20231511National Natural Science Foundation of China 32402651Nature Science Foundation of Hubei Province 2024AFB274Scientific Research Fund of Wuhan Institute of Technology K2023058
6 · The paper itself

Abstract

Pleurotus tuber-regium is a rare edible and medicinal sclerotium producing mushroom with high nutritional and medicinal benefits. The fruiting bodies of P. tuber-regium exhibit various medicinal properties such as antihypertensive, anti-inflammatory, and immunomodulatory activities. However, the molecular and genetic mechanisms underlying its growth and development at the transcriptional level have not been thoroughly investigated. To better understand the molecular mechanisms of fruiting body development in P. tuber-regium, the transcriptomic analysis was performed at five different developmental stages using RNA sequencing: Mycelium (DMS), Primordium (Pri), Differentiation (Dif), Young fruiting body (SFB), Mature fruiting body (FB). Differentially expressed genes (DEGs) were identified among different evaluation stage: 3,707, 824, 1,317 and 1,743 DEGs were detected between Pri versus DMS, Dif versus Pri, SFB versus Dif, and FB versus SFB, respectively. Transcriptome analysis revealed that the transition from vegetative mycelium to primordium is the most complex and critical step in the fruiting body development of P. tuber-regium. In addition, the DEGs related to vegetative mycelium growth, aerial mycelium growth, and fruiting body maturation were discussed, such as DEGs encoding glutaredoxin, hydrophobin, and aquaporin. The data from this study provide references for gaining insight into the molecular mechanisms of fruiting body development in P. tuber-regium.

Indexed as

Fruiting Bodies, FungalPleurotusFungal ProteinsGene Expression ProfilingGene Expression Regulation, FungalMyceliumTranscriptomeFungal Proteins

Identifiers

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.