Evidence map›Paper›PMID 41525141›Full record

ArticleMicrobial genomics2026

A public resource of 15 genomically characterized representative strains of

Sydney L Miles, Jane Hawkey, Ben Vezina, Vincenzo Torraca, Claire Jenkins, François-Xavier Weill, Stephen Baker, Kate S Baker, Serge Mostowy, Kathryn E Holt

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Genome sequence ofMicrobiology resource announcements · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sydney L MilesDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.
Jane HawkeyDepartment of Infectious Diseases, School of Translational Medicine, Monash University, Melbourne, Australia.
Ben VezinaDepartment of Infectious Diseases, School of Translational Medicine, Monash University, Melbourne, Australia.
Vincenzo TorracaDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.
Claire JenkinsGastrointestinal Bacterial Reference Unit, UK Health Security Agency, London, UK.
François-Xavier WeillInstitut Pasteur, Université Paris Cité, Unité des Bactéries pathogènes entériques, Centre National de Référence des Escherichia coli, Shigella et Salmonella, Paris, F-75015, France.
Stephen BakerA*STAR Infectious Disease Labs, Biopolis, Singapore.
Kate S BakerDepartment of Genetics, University of Cambridge, Cambridge, UK.
Serge MostowyDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.
Kathryn E HoltDepartment of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.

Funding

Wellcome Trust
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Genome, BacterialShigella sonneiDysentery, BacillaryGenomicsHumansPhylogenyPlasmidsWhole Genome Sequencingevolutiongenomicshost adaptationreference genomesShigella sonnei

Identifiers

PMID41525141
PMCPMC12795559

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.