Evidence map›Paper›PMID 41528819›Full record

ArticleG3 (Bethesda, Md.)2026

Transcriptome- and phenotype-based epistasis analysis in Caenorhabditis elegans reveals daf-16/FoxO-dependent and independent effects of daf-2/InsR in L1 starvation and recovery.

Kinsey Fisher, Rojin Chitrakar, L Ryan Baugh

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. An atlas of thebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. microPublication biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kinsey FisherDepartment of Biology, Duke University, Durham, NC 27708, United States.
Rojin ChitrakarDepartment of Biology, Duke University, Durham, NC 27708, United States.
L Ryan BaughDepartment of Biology, Duke University, Durham, NC 27708, United States.ORCID 0000-0003-2148-5492

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Systemic, maternal and transgenerational effects of nutrient stressR01GM117408 · NIGMS · DUKE UNIVERSITY · PI BAUGH, LARRY RYAN · 2015 to 2022
$2.5M
Genetic and Genomic Analysis of Starvation Resistance in C. elegansR01GM143159 · NIGMS · DUKE UNIVERSITY · PI BAUGH, LARRY RYAN · 2021 to 2024
$1.2M
Nutritional Control of Nematode DevelopmentR35GM156356 · NIGMS · DUKE UNIVERSITY · PI Larry Ryan Baugh · 2025 to 2026
$1.1M
NIGMS NIH HHS R01 GM117408NIGMS NIH HHS R01 GM143159NIGMS NIH HHS R35 GM156356NIH HHS R01GM117408NIH HHS R01GM143159NIH HHS R35GM156356ODCDC CDC HHS P40 OD010440ORIP NIH HHS P40 OD010440
6 · The paper itself

Abstract

Reduced insulin/IGF signaling (IIS) in Caenorhabditis elegans increases starvation resistance in a daf-16/FoxO-dependent fashion, but it is unclear whether the effects of reduced IIS are entirely dependent on daf-16/FoxO. We used RNA sequencing and phenotypic analysis of L1 starvation resistance to assess epistasis between daf-2/InsR and daf-16/FoxO. We identified 4,653 putative DAF-16/FoxO targets, many of which had not been previously identified, providing a valuable reference data set. Differential gene expression and increased survival caused by disruption of daf-2/InsR during starvation are daf-16-dependent. The effect of daf-2/InsR on growth following starvation is largely but not entirely daf-16-dependent. Notably, daf-16 is dispensable for reproduction following extended starvation, and daf-2 loss preserves reproductive success independent of daf-16. These results show that the effects of reduced IIS during L1 starvation are daf-16/FoxO-dependent but that IIS engages 1 or more additional effectors to buffer larval growth and especially reproduction from persistent effects of early life starvation.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsEpistasis, GeneticForkhead Transcription FactorsReceptor, InsulinTranscriptomeAnimalsInsulinPhenotypeSignal TransductionStarvationCaenorhabditis elegans Proteinsdaf-16 protein, C elegansDAF-2 protein, C elegansForkhead Transcription FactorsInsulinReceptor, Insulindaf-16/FoxOdaf-2/InsRdiapauseinsulinL1 arrestRNA-seqstarvation

Identifiers

PMID41528819
PMCPMC12958807

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.