Evidence map›Paper›PMID 41536475›Full record

ArticleF1000Research2025

Assessing the diagnostic accuracy of routine hematoxylin and eosin, Alcian Blue/Periodic Acid-Schiff, and Giemsa stains in the detection of

Nasar Alwahaibi, Al-Mutaz Al Mamari, Arwa Al Aamri, Yaqeen Al Sulimani, Alwaleed Al Balushi

Abstract read
In one paragraph

Article in F1000Research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nasar AlwahaibiDepartment of Biomedical Science, Sultan Qaboos University College of Medicine and Health Science, Muscat, 123, Oman.ORCID https://orcid.org/0000-0002-9421-0951
Al-Mutaz Al MamariDepartment of Biomedical Science, Sultan Qaboos University College of Medicine and Health Science, Muscat, 123, Oman.
Arwa Al AamriDepartment of Biomedical Science, Sultan Qaboos University College of Medicine and Health Science, Muscat, 123, Oman.
Yaqeen Al SulimaniDepartment of Biomedical Science, Sultan Qaboos University College of Medicine and Health Science, Muscat, 123, Oman.
Alwaleed Al BalushiDepartment of Biomedical Science, Sultan Qaboos University College of Medicine and Health Science, Muscat, 123, Oman.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hematoxylin and Eosin (H&E), Alcian Blue/Periodic Acid-Schiff (AB/PAS), and Giemsa stains are routinely used in the histopathological evaluation of gastric biopsies. However, comparative data on their diagnostic performance and cost-effectiveness in detecting Methods: A retrospective study was conducted on 816 gastric biopsy cases collected between 2019 and 2021. Three slides (H&E, Giemsa, and AB/PAS) were previously prepared from each paraffin-embedded tissue sample and blindly evaluated by three independent examiners. Sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and overall diagnostic accuracy were calculated using 2×2 contingency tables. Results: >H&E yielded a sensitivity of 51.6%, specificity of 74.4%, and diagnostic accuracy of 66.4% when compared to Giemsa as the reference standard. In comparison, AB/PAS exhibited a sensitivity of 45.9%, specificity of 73.2%, and an accuracy of 63.7%. When evaluating operational factors, H&E emerged as the most cost-effective and fastest method, while AB/PAS was associated with higher costs and longer processing times. Overall, Giemsa consistently demonstrated superior diagnostic performance across the assessed metrics, positioning it as the more reliable choice for Conclusions: H&E shows potential for initial screening but its limited sensitivity prevents definitive diagnosis. AB/PAS proved less effective and economical. Giemsa maintained superior diagnostic performance. This study provides a comparative methodological assessment, suggesting H&E and Giemsa combinations could enhance detection efficiency and accuracy. Further prospective validation is needed before clinical implementation.

Indexed as

Helicobacter InfectionsHelicobacter pyloriStomachAdultAgedAlcian BlueAzure StainsBiopsyColoring AgentsEosine Yellowish-(YS)FemaleHematoxylinHumansMaleMiddle AgedPeriodic Acid-Schiff ReactionAlcian BlueAzure StainsColoring AgentsEosine Yellowish-(YS)HematoxylinAlcian Blue/Periodic Acid-Schiffgastric biopsyGiemsa stainHelicobacter pylorihematoxylin and eosinsensitivityspecificity

Identifiers

PMID41536475
PMCPMC12796792

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.