Evidence map›Paper›PMID 41564373›Full record

ArticleJCO precision oncology2026

HER2 Protein Overexpression, mRNA Expression, and DNA Amplification Across Solid Tumors: Comparison of Next-Generation Sequencing-Based Assays With Immunohistochemistry.

Michiko Nagamine, Takao Fujisawa, Naoya Sakamoto, Yoshiaki Nakamura, Shigenori Kadowaki, Makoto Ueno, Shogen Boku, Yoshito Komatsu, Eiji Oki, Akitaka Makiyama and 15 more

Abstract readComparative Study
In one paragraph

Article in JCO precision oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Michiko NagamineDepartment of Pathology and Clinical Laboratories, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0001-6765-6117
Takao FujisawaTranslational Research Support Office, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0009-0002-3438-5757
Naoya SakamotoDepartment of Pathology and Clinical Laboratories, National Cancer Center Hospital East, Kashiwa, Japan.
Yoshiaki NakamuraTranslational Research Support Office, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0002-5241-6855
Shigenori KadowakiDepartment of Clinical Oncology, Aichi Cancer Center Hospital, Nagoya, Japan.ORCID 0000-0001-9923-5309
Makoto UenoDepartment of Gastroenterology, Kanagawa Cancer Center, Yokohama, Japan.ORCID 0000-0003-4480-0029
Shogen BokuCancer Treatment Center, Kansai Medical University Hospital, Osaka, Japan.ORCID 0000-0002-5015-0379
Yoshito KomatsuDivision of Cancer Chemotherapy, Hokkaido University Hospital Cancer Center, Sapporo, Japan.ORCID 0000-0002-1570-6802
Eiji OkiDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.ORCID 0000-0002-9763-9366
Akitaka MakiyamaCancer Center, Gifu University Hospital, Gifu, Japan.ORCID 0000-0002-4017-668X
Norio NonomuraDepartment of Urology, Osaka University Graduate School of Medicine, Suita, Japan.
Chigusa MorizaneDepartment of Hepatobiliary and Pancreatic Oncology, National Cancer Center Hospital, Tokyo, Japan.ORCID 0000-0002-6560-7503
Hidemichi WatariDepartment of Obstetrics and Gynecology, Hokkaido University Graduate School of Medicine, Sapporo, Japan.
Susumu OkanoDepartment of Head and Neck Medical Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0001-6639-9753
Hiroji IwataDepartment of Advanced Clinical Research and Development, Nagoya City University, Nagoya, Japan.ORCID 0000-0002-0242-4718
Kenjiro NamikawaDepartment of Dermatologic Oncology, National Cancer Center Hospital, Tokyo, Japan.ORCID 0000-0003-2763-7346
Yutaka HatanakaCenter for Development of Advanced Diagnostics, Hokkaido University Hospital, Sapporo, Japan.ORCID 0000-0003-3128-1477
Kanako C HatanakaCenter for Development of Advanced Diagnostics, Hokkaido University Hospital, Sapporo, Japan.ORCID 0009-0008-9596-9661
Kenichi TaguchiDepartment of Pathology, NHO Kyushu Cancer Center, Fukuoka, Japan.ORCID 0000-0002-6753-2795
David SpetzlerCaris Life Sciences, Phoenix, AZ.ORCID 0000-0002-9531-0970
Milan RadovichCaris Life Sciences, Phoenix, AZ.ORCID 0000-0001-9667-156X
Daniel MageeCaris Life Sciences, Phoenix, AZ.ORCID 0000-0001-7352-7485
Takayuki YoshinoDepartment of Gastroenterology and Gastrointestinal Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0002-0489-4756
Matthew OberleyCaris Life Sciences, Phoenix, AZ.ORCID 0000-0001-6419-2513
Takeshi KuwataDepartment of Genetic Medicine and Services, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0003-0044-953X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe tumor-agnostic approach has been increasingly adopted in precision oncology. Immunohistochemistry (IHC) is the standard biomarker testing for human epidermal growth factor receptor 2 (HER2)-targeted therapies, whereas next-generation sequencing (NGS) has been widely incorporated in routine clinical practices. Here, we investigated the concordance between NGS-based assays and IHC in HER2 testing. Interfering factors leading to discordant results between the assays were also studied. MATERIALS AND

methodsOver 78,000 solid tumors across various types from two independent cohorts in the United States and Japan were investigated for

resultsIn the US cohort (n = 77,267),

conclusionHER2-positive status in protein, mRNA, and DNA showed concordance in general but varied among tumor types. NGS-based assays, especially WTS, could be a useful predictive tool for HER2 testing in tumor-agnostic settings. Intratumor heterogeneity in HER2 protein expression should be considered when bringing bulk sequencing tests into clinical settings.

Indexed as

Erb-b2 Receptor Tyrosine KinasesHigh-Throughput Nucleotide SequencingImmunohistochemistryNeoplasmsRNA, MessengerBiomarkers, TumorFemaleHumansJapanBiomarkers, TumorERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesRNA, Messenger

Identifiers

PMID41564373
PMCPMC12834283

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.