Evidence map›Paper›PMID 41568973›Full record

ArticleJournal of bacteriology2026

Genus-specific remodeling of carbon and energy metabolism facilitates acetoclastic methanogenesis in

Blake E Downing, Dinesh Gupta, Katie E Shalvarjian, Dipti D Nayak

Abstract read
In one paragraph

Article in Journal of bacteriology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Blake E DowningDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.ORCID 0000-0003-4897-6849
Dinesh GuptaDepartment of Molecular and Cell Biology, University of California Berkeley, Berkeley, California, USA.
Katie E ShalvarjianDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.
Dipti D NayakDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA.ORCID 0000-0002-8390-7251

Funding

Training Research Educators in Minnesota (TREM) whilst increasing diversityK12GM119955 · NIGMS · UNIVERSITY OF MINNESOTA · PI David Irwin Greenstein, Julia Willett · 2017 to 2026
$6.5M
Developing Methanosarcina spp. as a model system to study cytochromes c and their role in archaeal methane metabolismF32GM150233 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI GUPTA, DINESH · 2023 to 2024
$136k
Alfred P. Sloan Foundation Sloan Research FellowshipArnold and Mabel Beckman Foundation Beckman Young investigator AwardDavid and Lucile Packard Foundation Packard Fellowship in Science and EngineeringKinship Foundation Searle Scholars AwardNational Science Foundation Graduate Research Fellowship Program 202299857NIGMS NIH HHS K12 GM119955NIH HHS F32GM150233Simons Foundation Early Career Investigator in Marine Microbial Ecology and EvolutionU.S. Department of Energy S589706
6 · The paper itself

Abstract

Methanogenic archaea (methanogens) are microorganisms that obligately produce methane as a byproduct of their energy metabolism. While most methanogens grow on CO IMPORTANCE: A large fraction of biogenic methane is derived from acetate, yet acetoclastic methanogens, i.e., methanogens that grow on acetate, remain poorly characterized due to their slow growth. Two groups of methanogens,

Indexed as

AcetatesCarbonEnergy MetabolismMethaneMethanosarcinaAcetate KinaseAcetyl Coenzyme AAcetate KinaseAcetatesAcetyl Coenzyme ACarbonMethaneacetoclastic methanogenesismethanogenMethanosarcinaMethanothrix

Identifiers

PMID41568973
PMCPMC12918732

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.