Evidence map›Paper›PMID 41582156›Full record

ArticleNature communications2026

Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling.

Ling-Dong Shi, Maria Florencia Ercoli, Junhyeong Kim, Artur Teixeira de Araujo Junior, Katerina Estera-Molina, Subah Soni, Tracy Satomi Weitz, Alexandra M Shigenaga, Ilija Dukovski, Rohan Sachdeva and 10 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Signaling by a tyrosine-sulfated peptide balances growth and osmotic stress response in rice.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Ling-Dong Shi *Innovative Genomics Institute, University of California, Berkeley, CA, USA.
Maria Florencia Ercoli *Department of Plant Pathology and the Genome Center, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0001-5587-6227
Junhyeong KimEnvironmental Science, Policy and Management, University of California, Berkeley, CA, USA.
Artur Teixeira de Araujo JuniorDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, USA.
Katerina Estera-MolinaInnovative Genomics Institute, University of California, Berkeley, CA, USA.
Subah SoniDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, USA.ORCID http://orcid.org/0009-0003-3132-418X
Tracy Satomi WeitzDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, USA.
Alexandra M ShigenagaDepartment of Plant Pathology and the Genome Center, University of California, Davis, CA, USA.
Ilija DukovskiBioinformatics Program, Faculty of Computing and Data Sciences, Boston University, Boston, MA, USA.
Rohan SachdevaInnovative Genomics Institute, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-9284-2245
Halbay TurumtayFeedstocks Division, Joint BioEnergy Institute, Emeryville, CA, USA.
Katherine B LouieJoint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-6787-7558
Benjamin P BowenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-1368-3958
Suzanne M KosinaEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-2885-1248
Henrik V SchellerFeedstocks Division, Joint BioEnergy Institute, Emeryville, CA, USA.ORCID http://orcid.org/0000-0002-6702-3560
Jennifer Pett-RidgeInnovative Genomics Institute, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-4439-2398
Daniel SegrèBioinformatics Program, Faculty of Computing and Data Sciences, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0003-4859-1914
Trent R NorthenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-5903-1870
Pamela C RonaldInnovative Genomics Institute, University of California, Berkeley, CA, USA. pcronald@ucdavis.edu.ORCID http://orcid.org/0000-0002-4107-1345
Jillian F BanfieldInnovative Genomics Institute, University of California, Berkeley, CA, USA. jbanfield@berkeley.edu.ORCID http://orcid.org/0000-0001-8203-8771

Funding

Bill & Melinda Gates Foundation INV-037174Chan Zuckerberg Initiative FoundationGates Foundation INV-037174
6 · The paper itself

Abstract

Rice paddies significantly contribute to atmospheric methane (CH

Indexed as

HydrogenMethaneOryzaRhizosphereBacteriaGenotypeOxidation-ReductionPlant RootsPlants, Genetically ModifiedSoil MicrobiologyTyrosineHydrogenMethaneTyrosine

Identifiers

PMID41582156
PMCPMC12946211

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.