Evidence map›Paper›PMID 41589512›Full record

ArticleRapid communications in mass spectrometry : RCM2026

Phospholipid Profiling Established by Structure-Rich Fragments for Molecular Species Level Shotgun Analysis.

Rong Chen, Amber H Jannasch, Bruce R Cooper, Jonathan H Shannahan, Christina R Ferreira

Abstract read
In one paragraph

Article in Rapid communications in mass spectrometry : RCM, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rong ChenDepartment of Chemistry, Purdue University, West Lafayette, Indiana, USA.
Amber H JannaschMetabolite Profiling Facility, Bindley Bioscience Center, Purdue University, West Lafayette, Indiana, USA.
Bruce R CooperMetabolite Profiling Facility, Bindley Bioscience Center, Purdue University, West Lafayette, Indiana, USA.
Jonathan H ShannahanSchool of Health Sciences, Purdue University, West Lafayette, Indiana, USA.
Christina R FerreiraMetabolite Profiling Facility, Bindley Bioscience Center, Purdue University, West Lafayette, Indiana, USA.

Funding

Compromised Resolution of Inflammation following Nanoparticle Exposure in Metabolic SyndromeR01ES033173 · NIEHS · PURDUE UNIVERSITY · PI Jonathan Henry Shannahan · 2022 to 2026
$1.7M
Bindley Bioscience Center FY24/Method Devel Prog./C. FerreiraNIEHS NIH HHS R01 ES033173NIEHS NIH HHS R01ES033173
6 · The paper itself

Abstract

rationaleAccurate identification of phospholipid molecular species remains a major challenge in shotgun lipidomics because conventional tandem mass spectrometry typically resolves only one structural moiety at a time. This structural ambiguity limits confident lipid biomarker discovery and biological interpretation. Improving structural specificity without sacrificing analytical speed is therefore critical for lipidomics and disease-related studies.

methodsElectrospray ionization tandem mass spectrometry was performed using direct infusion on a triple quadrupole mass spectrometer operated in multiple reaction monitoring (MRM) mode. MRMs were designed based on structure-rich phospholipid fragments containing both the headgroup and one fatty acyl chain. Lipids were extracted from mouse liver and brain tissues and analysed without chromatographic separation, and normal-phase LC was used for lipid headgroup confirmation only.

resultsStructure-rich MS/MS transitions enabled molecular species identification of both diacyl and ether phospholipids. 15 PUFA-containing phospholipids were identified as candidate biomarkers differentiating healthy and metabolic syndrome mouse livers, revealing opposing regulation among structurally similar species supported by complementary fragmentation and LC evidence. In mouse brains, three ether lipid biomarkers were discovered, including plasmalogens and plasmanyl lipids, with distinct disease-associated trends.

conclusionThis study demonstrates that structure-rich MS/MS transitions substantially improve phospholipid structural specificity in shotgun lipidomics while maintaining high throughput. The method enables reliable identification of individual lipid species with minimal isomer interference and is readily compatible with existing workflows. This strategy offers a practical path toward more precise lipid biomarker discovery and mechanistic insight into metabolic disease.

Indexed as

LipidomicsPhospholipidsTandem Mass SpectrometryAnimalsBiomarkersBrainBrain ChemistryLiverMaleMetabolic SyndromeMiceMice, Inbred C57BLSpectrometry, Mass, Electrospray IonizationBiomarkersPhospholipidsmass spectrometrymetabolic syndromephospholipidsplasmalogensshotgun lipidomics

Identifiers

PMID41589512
PMCPMC12836315

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.