Evidence map›Paper›PMID 41617032›Full record

ArticleThe Journal of biological chemistry2026

A conserved salt bridge network stabilizes the hepatic organic anion transporters OATP1B1 and OATP1B3.

Drew Barber, Fiona Naughton, Niek van Hilten, Michael Grabe, Aviv Paz

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Drew BarberHauptman-Woodward Research Institute, University at Buffalo, The State University of New York, Buffalo, New York, USA; Department of Structural Biology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, The State University of New York, Buffalo, New York, USA.
Fiona NaughtonDepartment of Pharmaceutical Chemistry, Cardiovascular Research Institute, University of California, San Francisco, California, USA.
Niek van HiltenDepartment of Pharmaceutical Chemistry, Cardiovascular Research Institute, University of California, San Francisco, California, USA.
Michael GrabeDepartment of Pharmaceutical Chemistry, Cardiovascular Research Institute, University of California, San Francisco, California, USA.
Aviv PazHauptman-Woodward Research Institute, University at Buffalo, The State University of New York, Buffalo, New York, USA; Department of Structural Biology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, The State University of New York, Buffalo, New York, USA. Electronic address: avivpaz@buffalo.edu.

Funding

Structure meets function for OATP1B1, a transporter involved in the uptake of endogenous and xenobiotic materials and drugsR01GM149871 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI Aviv Paz · 2023 to 2026
$2.0M
NIGMS NIH HHS R01 GM149871
6 · The paper itself

Abstract

The organic anion transporting polypeptide (OATP)-1B1 and -1B3 are liver-specific transporters that govern the uptake of numerous endogenous molecules and drugs before their metabolism and excretion by the hepatocytes. Structurally, these two transporters are members of the major facilitator superfamily, operating by the alternating access mechanism that facilitates the movement of solutes between extracellular and intracellular compartments. Given their dynamic nature, salt bridges often modulate the conformations of transporters and participate in the orchestration of conformational changes. In this study, we identified and characterized a network of salt bridges within the internal cavities of OATP1B1 and OATP1B3 by cell-based uptake assays, uptake kinetics, and molecular dynamics simulations. These experiments revealed that a salt bridge network centered around E185 is crucial for uptake activities in these two proteins, as it stabilizes the inward cavity of the proteins and bridges the N- and C- bundles of the protein. Interestingly, this salt bridge network changes as a function of conformation. Furthermore, the residues studied do not participate in ligand coordination in the published structures nor in our simulations. These findings advance our understanding of the elaborate network of ionic interactions that govern the structure and dynamics of OATP1B1, OATP1B3, and other MFS transporters.

Indexed as

LiverLiver-Specific Organic Anion Transporter 1Solute Carrier Organic Anion Transporter Family Member 1B3AnimalsHumansMolecular Dynamics SimulationLiver-Specific Organic Anion Transporter 1SLCO1B1 protein, humanSLCO1B3 protein, humanSolute Carrier Organic Anion Transporter Family Member 1B3conformationmolecular dynamicsOATPOATP1B1OATP1B3organic anion transporting polypeptidessalt bridgeSLCOtransporter

Identifiers

PMID41617032
PMCPMC12955633

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.