Evidence map›Paper›PMID 41644690›Full record

ArticleDiscover oncology2026

Bioinformatic analysis and cellular functional assays uncover the role of NXPH4 in breast cancer.

Dong Dong Yang, Ze Kuan Xue, Sheng Qiu Jia, Cheng Hao Liu, Rui Yang, Chun Ling Chen, Yong Zhou Huang, Xin Chun Zhao, Gui Lin Huang, Ji Xue Hou

Abstract read
In one paragraph

Article in Discover oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Dong Dong YangThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Ze Kuan XueThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Sheng Qiu JiaThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Cheng Hao LiuThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Rui YangDepartment of Breast and Thyroid Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Chun Ling ChenThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Yong Zhou HuangThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Xin Chun ZhaoThe First Affiliated Hospital of Shihezi University, Shihezi, China.
Gui Lin HuangThe First Affiliated Hospital of Shihezi University, Shihezi, China. 15559016883@163.com.
Ji Xue HouThe First Affiliated Hospital of Shihezi University, Shihezi, China. hjx1506@163.com.

Funding

Foundation for Innovative Research Groups of the National Natural Science Foundation of China No.82260105the Science and Technology Program of Xinjiang Production & Construction Corps, China . 2024AB065
6 · The paper itself

Abstract

backgroundTo investigate the relationship between NXPH4 expression and prognosis in breast cancer (BRCA) and to elucidate its potential functional role.

methodsNXPH4 expression data in breast tumor and normal tissues were collected from the TCGA, GTEx, and GEO databases. Its expression localization was assessed using single-cell sequencing and spatial transcriptomics. The impact of NXPH4 on breast cancer cell proliferation and apoptosis was validated experimentally via CCK-8, EdU assays, and Western Blot. Kaplan-Meier analysis was used to evaluate the correlation between NXPH4 expression and Overall Survival (OS), Disease-Specific Survival (DSS), Progression-Free Interval (PFI), and Disease-Free Interval (DFI) in the TCGA cohort. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA) were performed to explore the biological pathways associated with NXPH4-related differentially expressed genes. The associations of NXPH4 with immune cell infiltration and immune-related genes were examined across multiple datasets. The UALCAN and MethSurv databases were utilized to assess NXPH4 promoter methylation levels and the prognostic significance of specific hypermethylated sites. Drug sensitivity in BRCA patients was predicted using the GDSC1 and GDSC2 databases.​​

resultNXPH4 expression was significantly upregulated in breast cancer tissues and was primarily localized to malignant cells. In vitro experiments demonstrated that inhibiting NXPH4 affected breast cancer cell proliferation and apoptosis levels. Patients with high NXPH4 expression had a significantly shorter overall survival. The methylation level of the NXPH4 promoter was higher in tumor tissues compared to normal tissues, and methylation at specific sites was closely associated with patient prognosis. NXPH4 expression was correlated with cell cycle regulation, invasion processes, immune cell infiltration, and immune-related gene expression. High NXPH4 expression was associated with higher IC50 values for most chemotherapeutic drugs, suggesting relative chemoresistance, whereas drugs with lower IC50 values showed potentially better inhibitory effects.

conclusionNXPH4 is highly expressed in breast cancer and is associated with poor prognosis. It may influence disease progression by regulating cell proliferation, immune infiltration, and other processes, indicating its potential as a prognostic biomarker and therapeutic target.

Indexed as

BiomarkerDrug sensitivityImmune infiltrationNXPH4PrognosisProliferation

Identifiers

PMID41644690
PMCPMC12972368

What Socratic holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.