Evidence map›Paper›PMID 41660047›Full record

ArticleThe journal of allergy and clinical immunology. Global2026

Distinct blood transcriptomic profiling underlying asthma establishment and exacerbation.

Baojun Wu, Mao Yang, Donglei Hu, Samantha Hochstadt, Bo Hyun Lee, David E Lanfear, Jonathan Witonsky, Paul Stemmer, Esteban G Burchard, Elad Ziv and 1 more

Abstract read
In one paragraph

Article in The journal of allergy and clinical immunology. Global, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Baojun WuCenter for Individualized and Genomic Medicine Research, Department of Medicine, Henry Ford Health, Detroit, Mich.
Mao YangCenter for Individualized and Genomic Medicine Research, Department of Medicine, Henry Ford Health, Detroit, Mich.
Donglei HuDepartment of Medicine, University of California San Francisco, San Francisco, Calif.
Samantha HochstadtCenter for Individualized and Genomic Medicine Research, Department of Medicine, Henry Ford Health, Detroit, Mich.
Bo Hyun LeeInstitute of Environmental Health Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, Detroit, Mich.
David E LanfearCenter for Individualized and Genomic Medicine Research, Department of Medicine, Henry Ford Health, Detroit, Mich.
Jonathan WitonskyDepartment of Pediatrics, University of California San Francisco, San Francisco, Calif.
Paul StemmerInstitute of Environmental Health Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, Detroit, Mich.
Esteban G BurchardDepartment of Medicine, University of California San Francisco, San Francisco, Calif.
Elad ZivDepartment of Medicine, University of California San Francisco, San Francisco, Calif.
L Keoki WilliamsCenter for Individualized and Genomic Medicine Research, Department of Medicine, Henry Ford Health, Detroit, Mich.

Funding

Transcriptomic and Pharmacogenetic Asthma Endotypes in Minority ChildrenR01HL135156 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A, ZIV, ELAD · 2017 to 2021
$4.1M
NHLBI NIH HHS R01 HL135156
6 · The paper itself

Abstract

Background: Non-Hispanic Black individuals are disproportionately affected by asthma and severe asthma exacerbations. To elucidate asthma pathogenesis, it is essential to understand the dysregulated gene expression patterns linked to asthma status. Objective: We sought to characterize whole blood gene expression and molecular pathways associated with asthma progression in non-Hispanic Black individuals. Methods: RNA sequencing was performed on whole blood samples from individuals enrolled in the Study of Asthma Phenotypes and Pharmacogenomic Interactions by Race-Ethnicity (SAPPHIRE). Participants were categorized into 4 groups based on their clinical status. We characterized transcriptomic signatures specific to distinct disease states: one reflecting asthma establishment and another representing disease exacerbation. From these, we identified candidate biological processes enriched during each transition that are particularly relevant to asthma. Additionally, we pinpointed key molecular drivers and screened for drugs targeting these critical genes. Results: Compared with healthy control subjects, patients with controlled asthma showed upregulation of genes involved in intestinal IgA production, asthma-related pathways, and antigen processing and presentation. When compared with participants with uncontrolled asthma, individuals with an impending asthma exacerbation had upregulation of genes in pathways associated with Fcγ receptor-mediated phagocytosis, T Conclusions: Blood gene expression profiling in non-Hispanic Black individuals revealed potential targets and preventive drug candidates for asthma exacerbations, providing new insights for the future treatments.

Indexed as

asthma exacerbationcontrolled asthmadriver genesdrug repurposingGene expression profilingnon-Hispanic Blackuncontrolled asthma

Identifiers

PMID41660047
PMCPMC12876672

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.