Evidence map›Paper›PMID 41669967›Full record

ReviewThe plant genome2026

Epigenetic modifications regulate peg elongation and underground fruiting in peanut in response to environmental cues.

Yohannes Gelaye, Huaiyong Luo

Abstract readReview
In one paragraph

Review in The plant genome, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yohannes GelayeKey Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture, Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences (CAAS), Wuhan, China.ORCID https://orcid.org/0000-0002-6772-0198
Huaiyong LuoKey Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture, Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences (CAAS), Wuhan, China.

Funding

Agricultural Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences CAAS-ASTIP-2021-OCRICentral Public-interest Scientific Institution Basal Research Fund Y2025YC112Earmarked Fund for China Agriculture Research System CARS-13Nanfan special project of CAAS YBXM2552National Natural Science Foundation of China 32171997National Natural Science Foundation of China 32341039
6 · The paper itself

Abstract

Epigenetic regulation plays a central role in coordinating peanut (Arachis hypogaea L.) fruit pegging, a unique developmental process in which fertilized ovaries transition from aerial growth to subterranean pod formation. This review synthesizes current evidence demonstrating that dynamic interactions among DNA methylation, histone modifications, and small RNA-mediated pathways govern peg elongation, directional growth, and successful pod initiation in Arachis hypogaea L. The methylome and transcriptomic studies reveal that context-specific DNA methylation and reversible histone marks function as regulatory switches that integrate environmental signals such as light, gravity, temperature, and soil conditions with developmental gene expression programs. Activating chromatin states promote cell division and hormone-responsive pathways during peg elongation, whereas repressive marks and RNA-directed DNA methylation maintain genome stability and prevent premature differentiation. Crosstalk between epigenetic regulators and hormonal networks, particularly auxin and ethylene signaling, emerges as a conserved mechanism fine-tuning cellular differentiation and peg curvature during soil penetration. Small RNAs further contribute to this regulatory network by modulating key transcription factors and signaling components at post-transcriptional and epigenetic levels. Most importantly, comparative analyses across genotypes and stress conditions indicate that some epigenetic modifications are developmentally dynamic, while others exhibit stability with potential heritability, indicating their relevance for breeding. Overall, this review concludes that epigenetic mechanisms constitute an integrative regulatory framework linking environmental perception with developmental plasticity in peanut fruit pegging, offering promising opportunities to harness epigenetic variation for improving yield stability, stress resilience, and climate-adaptive peanut breeding strategies.

Indexed as

ArachisEpigenesis, GeneticFruitDNA MethylationGene Expression Regulation, Plant

Identifiers

PMID41669967
PMCPMC12895982

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.